Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_F18
(882 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 9e-04
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 40 0.004
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 40 0.004
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 37 0.019
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 37 0.019
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.043
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.057
SB_15403| Best HMM Match : CH (HMM E-Value=0) 35 0.076
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076
SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 34 0.18
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 32 0.53
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.6
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.2
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 30 2.9
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 30 2.9
SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16) 29 3.8
SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84) 29 3.8
SB_41393| Best HMM Match : WSC (HMM E-Value=0.06) 29 5.0
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 6.6
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V C AG+ C + G A C C+ +CP D + VC + T+ + C ++R C+
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHRIACV 112
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC CSA CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q C+
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQACM 1821
Score = 38.3 bits (85), Expect = 0.008
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = +2
Query: 395 PCLKVHCSAGRV--CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC +CS+ C+ + G A C C +DCP + + VC + N + ++C + + C
Sbjct: 1348 PCEGFNCSSPPYSSCQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNECLMQARAC 1403
Query: 569 -----LCLDNSDQCRGPXYHHVQIEYYGTCREMPDCTESEMSDF-PRS 694
+ + C H Y TC+ + D E S PRS
Sbjct: 1404 ATNKTITAHRNGYCDPCKNHSCSTPPYSTCKAVDDKAECVCSKVCPRS 1451
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 395 PCLKVHCS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC + C G VC + C C CP S+R VC + T+ S C ++R C
Sbjct: 2977 PCERYKCRYQGEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHRTAC 3034
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 395 PCLKVHC-SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC++ C S GD+ CI CP ++ +C + N T+ S C + R C
Sbjct: 1836 PCVRYDCGSTNPYSTCKPKGDSGFECI--CPTCPKAKDYLCASNNLTYMSKCHLERASC 1892
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V+C++ +C C ++C D VC + N T+ ++C + +Q C+
Sbjct: 1181 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGSDNNTYDNECLMRQQACV 1237
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V+C++ +C C ++C D VC N T+ ++C + +Q C+
Sbjct: 1110 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACV 1166
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 458 MCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
+C+C DC ET + +C + +T+ ++C + ++ C
Sbjct: 2151 VCSCPDDCTNET---KPICASDGQTYDNECLMQKRAC 2184
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 431 CEINEH-GDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
CE ++ G C C DC ++D VC + N T+ S+C + R CL
Sbjct: 206 CEADKSSGVITCKC-PDCKDKSDP---VCGSDNVTYASECQLRRAACL 249
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PCL V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVC 356
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PCL V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCLLKKHVC 133
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PCL V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVC 90
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC + C+ C+ DA C C + CP D R C + T+++DC + C
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 205
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 37.1 bits (82), Expect = 0.019
Identities = 24/77 (31%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLC 574
PCL V C CE DA C C CP D VC +T+ + C + C
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDNLCLFKKHVCRI 247
Query: 575 LDN-----SDQCRGPXY 610
N CRG Y
Sbjct: 248 KGNFSYLHHGSCRGTHY 264
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQR 565
PC C G VC GD C C CP D VC+ FN+ +++ C +++
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHKYA 172
Query: 566 C 568
C
Sbjct: 173 C 173
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC V C C G A+C C +CP E VC T+ S C + + C
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARAC 833
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PCLK+ C C + G A C C DC + + VC T+ ++C C
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH---TYSPVCGGDKTTYINNCTRIAAAC 282
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC ++ CS C + +G A C C + C + VC + + C + R C
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQCQVRF---KPVCGTDGREYLNRCFLRRNAC 763
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC C G CEI E G +C C C D VC + +T+ + C + + C
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSLTAEAC 1852
Score = 35.1 bits (77), Expect = 0.076
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLC 574
PC V C C G +C C+ CP + + VC + T++S+C + + C
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPPD-NQNASVCGSDLVTYRSECELKAKSCNA 1465
Query: 575 LDN 583
+ N
Sbjct: 1466 MRN 1468
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEI-NEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC C A + C I N + +C + CP S VC + +T+ S+C V + C
Sbjct: 1047 PCALRRCFAEQTCVISNGKAECVCPTVDQCP----SGSTVCASDGKTYASECHVKVRNC 1101
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC + C + C ++ A C C K CP S +C + +T+ + C + C
Sbjct: 1337 PCNRTQCPSYSRCVLDSSLQAKCVCTKSCPL---SYEPLCASNGKTFPNQCALDMAAC 1391
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC + C G C +G A C C +C T VC + +++ S C + R CL
Sbjct: 1729 PCDDLQCLHGSTCVRRVNGSASCQC-PEC--RTLKYTPVCGDDGKSYLSTCMLKRLACL 1784
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 398 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
C + C +C + G C+C CP S + VC + +++ S+C + ++ C
Sbjct: 1659 CGNIRCPRFSMCISAQEGGIKCSCPIYCP---PSGQPVCGSDGKSYGSECELRKEAC 1712
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNC--IKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC +V C R C ++ C C +CP D+ VC ++ ++C + + C
Sbjct: 192 PCSRVKCKEDRHCVVDMDMKPKCICPSESECPLTVDT---VCGTDKSSYLNECVMKARAC 248
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +2
Query: 398 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
C KV C C + +G A C+C CP + VC ET + C + + C
Sbjct: 1515 CSKVTCHRYAKCNNHYNGTASCSCSSRCPL---VYKPVCGTDMETHINACLLKLKSC 1568
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 35.1 bits (77), Expect = 0.076
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLC 574
PC KV C+ C G C C + CP S ++VC + + + ++C + + C
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVCGSDDRDYANECVLQARACTW 1594
Query: 575 LDN 583
D+
Sbjct: 1595 RDS 1597
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +2
Query: 398 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
CL C G VC+ G C C C T VC + T+ + C + RC
Sbjct: 701 CLVQPCKYGGVCQAGADGKTKCVCSAAC---TREYAPVCGSDGNTYNNLCLLTAARC 754
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 35.1 bits (77), Expect = 0.076
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V C C++ + G C C C YE VC +T+ + C + CL
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEMRASACL 1326
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC C G+ C + +G A C C CP D VC + +T+ + C + C+
Sbjct: 1573 PCEITLCDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDMDADACI 1627
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNC-IKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC + C+ + + G+ MC C + +CP + VC + T+ ++C + C
Sbjct: 1865 PCGNIKCTHKQQQCVVRSGEPMCECVVNECPKNSSK---VCGSDGWTYDNECFLKLYTC 1920
>SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 398 CLKVHCSAGRVCEINEHGDAM-CNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
C + C GR C I E G++ C C C E VC+ F S+C +++Q C
Sbjct: 600 CHQSICPRGRECIIGEDGNSTSCECSAVCSSE---HAPVCSVFYTDHASECEMHKQAC 654
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC++V C VC+ DA C C +C + R C N T+ ++C + C
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNECTHQKAMC 330
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC K C G +C + G C C CP ++ VC+ + + + C ++ C+
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCELHMFACI 68
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 407 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
+ C+ C+ DA C C + CP D R C + T+++DC + C
Sbjct: 1 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 51
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLC 574
PC CS R + +G A C C K C T VC + N+T+ + C + + C
Sbjct: 172 PCEISLCSFPRPICVEVNGTATCECPKVC---TLDYTPVCGSDNKTYANLCNLEVEACK- 227
Query: 575 LDNSDQCRGPXYHHVQIEYYGTCREMPDCT 664
+N+D+ +Q+ + G C PD T
Sbjct: 228 PENTDK--------LQLLHDGPCPPTPDNT 249
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC CS + +N +G A C C + C T VC +T+ + C + R C
Sbjct: 94 PCDIALCSFPQSICVNVNGTATCECPRAC---TRELMPVCGTDQKTYDNMCLLERAAC 148
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V+C++ +C C ++C D VC + N T+ ++C + +Q C+
Sbjct: 250 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGSDNNTYDNECLMRQQACV 306
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V+C++ +C C ++C D VC N T+ ++C + +Q C+
Sbjct: 136 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACV 192
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 29.9 bits (64), Expect = 2.9
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +3
Query: 285 RAWTRSDTMRQK*PELTTFSTRSLM---KRMKTKKSTWKTLA*KSTAAQDVSAKST---- 443
R W R D ++ E + S K +K KK K LA +S + A +
Sbjct: 127 RVWERDDDPKKSPSEKKLKRSNSQEENGKPVKVKKEVNKALAMESAGFMNALATAAVAAP 186
Query: 444 -NTETPCVTASRTVPTRQTPDAWCAQTSTKP 533
+ P TA +T PT TP A T+ KP
Sbjct: 187 RKRKRPATTAQKT-PTATTPTTPTASTAVKP 216
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC V+C++ +C C ++C D VC N T+ ++C + +Q C+
Sbjct: 2 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACV 58
>SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16)
Length = 711
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLC 574
PC + C VC G + +D + ++ C ++T D V + +C
Sbjct: 349 PCQESDCGENEVCVPFPRGPCLIAKTRDGKMDVKCKQYQCVPIDQTCSED--VLPKDMVC 406
Query: 575 LDNS----DQCRGPXYHHVQIEYYGTCRE 649
++ +C G H V Y G CRE
Sbjct: 407 GEDGVSYPSEC-GMIKHSVTFAYRGPCRE 434
>SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84)
Length = 746
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 434 EINEHGDAMCNCIKDCPY----ETDSRRMVCTNFNETWQSDCXVYRQRCLCL 577
++ EH +C+ C + E+D + N+ Q+DC V++QR + L
Sbjct: 67 QLMEHSVKYASCVPFCTWMAELESDLMNVFRFNWGSMQQNDCAVFKQRVMSL 118
>SB_41393| Best HMM Match : WSC (HMM E-Value=0.06)
Length = 361
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 533 WQS-DCXVYRQRCLCLDNSDQCRGPXYHHVQIEYYGTCREMPDCT 664
W + D + R C C ++ + YH+ I+YYG C P T
Sbjct: 222 WHNWDFYIKRLVCRCAQSA---KAKGYHYFAIQYYGVCYSGPTTT 263
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC CSA + G+A+C C+ CP D VC + + + + C + + C
Sbjct: 250 PCQTSPCSAPYAKCLVVQGEAVCTCL-SCPNMLDP---VCGSDGKNYDNVCKLRQNAC 303
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 434 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQ 562
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,818,105
Number of Sequences: 59808
Number of extensions: 484499
Number of successful extensions: 1376
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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