Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_F18
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 93 3e-19
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 93 3e-19
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 41 0.001
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 41 0.001
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.83
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 31 1.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.9
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 28 7.7
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC C G+ C + + G+ C CI CP + D VC N N+T+ S C +YR+RCL
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111
Query: 572 CLDNSDQCRGPXYHHVQIEYYGTCREMPDCTESEMSDFPRSHAGLAF 712
C S +C V +EY G C+++ +CTE M+ FP A F
Sbjct: 112 CKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLF 158
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCXVYRQRCL 571
PC C G+ C + + G+ C CI CP + D VC N N+T+ S C +YR+RCL
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111
Query: 572 CLDNSDQCRGPXYHHVQIEYYGTCREMPDCTESEMSDFPRSHAGLAF 712
C S +C V +EY G C+++ +CTE M+ FP A F
Sbjct: 112 CKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLF 158
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 404 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCXVYRQRC 568
K C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC K+ C C + A C C C D R VC ET+ ++C + ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKKSC 423
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC-- 568
PC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAACKE 351
Query: 569 ---LCLDNSDQC--RGPXYHHVQIEYYGTCREMPDCT 664
+ + C G ++ ++G+C PD T
Sbjct: 352 QKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRT 388
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +2
Query: 413 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLCLDN--- 583
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 448 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 584 --SDQCRGPXYHHVQIEYYGTC 643
+ C + ++Y C
Sbjct: 503 KYNSACEACKLKKEKCDFYSAC 524
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 404 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCXVYRQRC 568
K C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC 568
PC K+ C C + A C C C D R VC ET+ ++C + ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKKSC 431
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Frame = +2
Query: 395 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRC-- 568
PC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAACKE 359
Query: 569 ---LCLDNSDQC--RGPXYHHVQIEYYGTCREMPDCT 664
+ + C G ++ ++G+C PD T
Sbjct: 360 QKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRT 396
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +2
Query: 413 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCXVYRQRCLCLDN--- 583
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 456 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 584 --SDQCRGPXYHHVQIEYYGTC 643
+ C + ++Y C
Sbjct: 511 KYNSACEACKLKKEKCDFYSAC 532
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 413 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCXVYRQRC---LCL 577
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 578 DNSDQC 595
+ S +C
Sbjct: 445 EESLKC 450
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 413 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCXVYRQRC---LCL 577
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 578 DNSDQC 595
+ S +C
Sbjct: 445 EESLKC 450
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 333 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 512
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 513 AQTSTKP 533
T T P
Sbjct: 319 KSTPTTP 325
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 339 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 518
++T+ MK+ +T T+ KST + KST T T ++ PT T
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206
Query: 519 TSTKP 533
T T P
Sbjct: 207 TPTTP 211
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 333 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 512
TT +T + MK T +T K+ +T + KST T T ++ PT T
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331
Query: 513 AQTSTKP 533
T T P
Sbjct: 332 KSTPTTP 338
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +2
Query: 413 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 547
CS G C G+ MC C D Y S C + C
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKC 259
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 333 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 503
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 504 AWCAQTSTKPGNRIXXXXXXXXXXXXXLISAVVRXTTTFKSSITERAEKCLTA 662
+ S+ P N I + + TT S+ T E T+
Sbjct: 369 I-TSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTS 420
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 333 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 503
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 504 AWCAQTSTKPGNRIXXXXXXXXXXXXXLISAVVRXTTTFKSSITERAEKCLTA 662
+ S+ P N I + + TT S+ T E T+
Sbjct: 369 I-TSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTS 420
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 261 NTSSTECLRA--WTRSDTMRQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSA 434
N +S +R WT+ K P+ T F+T + T +T T +T++ S
Sbjct: 410 NVTSPPVIRPSYWTKHRVKSTKEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSS---ST 466
Query: 435 KSTNTETPC-VTASRTVPTRQT 497
+T T TP VT++ T PT T
Sbjct: 467 TTTTTTTPVPVTSTTTEPTTTT 488
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 422 GRVCEINEHGDAM-CNCIKD-CPYETDSRRMVCTNFNETWQSDCXVYRQRCLCLDNSDQC 595
G +CE + + + C + D C + CTN T+ DC + C N D+C
Sbjct: 123 GYMCECADGYEGVHCQHLVDHCAKQPCHNNATCTNMGATYHCDCTLGFDGVHCEMNIDEC 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,826
Number of Sequences: 27780
Number of extensions: 334205
Number of successful extensions: 976
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -