Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F16
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4, ...    34   0.78 
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          32   2.4  

>Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 195

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -1

Query: 294 GPRSPGPL*RCHHGCSCPFFQFS*RSSTWAREQRWSFSKPAPERRRRIGSL 142
           GPR+PGP     HG   P      R  +W RE+     KP   +RR +G +
Sbjct: 16  GPRAPGPSLLVRHGSGLPPSALK-RGPSWTRERTLVAVKPDGVQRRLVGDV 65


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
 Frame = +3

Query: 648 LGPPKLKCXEKXLXXXXXGPXGXXGPXSXXQXPXXXPQXP--SXXXSTXXGRXXXXXPPX 821
           LGPP L            GP    GP +    P   P  P  S    T         PP 
Sbjct: 13  LGPPGLPPLPGPKGGFEPGPPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPP 72

Query: 822 XXPPPPXXXGXXXXGPPP 875
             PPPP         PPP
Sbjct: 73  PPPPPPPPQQPPPPPPPP 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,105,156
Number of Sequences: 237096
Number of extensions: 1871645
Number of successful extensions: 8416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7992
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)