Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F15
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122176-1|AAM52688.1|  807|Drosophila melanogaster LD35461p pro...    31   1.6  
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    31   2.2  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    31   2.2  
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro...    31   2.2  
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro...    31   2.2  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    31   2.2  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    31   2.2  

>AY122176-1|AAM52688.1|  807|Drosophila melanogaster LD35461p
           protein.
          Length = 807

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 226 SVASHHRXLGPERCRRXEL-RTWRP 155
           S+ASH    GP+RC++ E+ RTW P
Sbjct: 769 SIASHWHGHGPKRCQQNEVPRTWTP 793


>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
            protein.
          Length = 1788

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 394  SRXALGDANGKAKEALEQSRQNIERTXEELRK 489
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
            D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 394  SRXALGDANGKAKEALEQSRQNIERTXEELRK 489
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p protein.
          Length = 1296

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 394  SRXALGDANGKAKEALEQSRQNIERTXEELRK 489
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1108 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1139


>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
           protein.
          Length = 1026

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 394 SRXALGDANGKAKEALEQSRQNIERTXEELRK 489
           S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 838 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 869


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
            isoform B protein.
          Length = 1788

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 394  SRXALGDANGKAKEALEQSRQNIERTXEELRK 489
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
            isoform A protein.
          Length = 1788

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 394  SRXALGDANGKAKEALEQSRQNIERTXEELRK 489
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,241,706
Number of Sequences: 53049
Number of extensions: 306955
Number of successful extensions: 933
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)