Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F13
         (857 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p pro...    29   6.2  
AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p pro...    29   6.2  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    29   6.2  

>AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p
           protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 4/91 (4%)
 Frame = +1

Query: 214 PPGIX-PXXGPPKXKXLWSXXXXXXXXXXXXXVGXXGKXPPXFKXPVGGWGAPL*XXGGX 390
           PPG   P   PP      S                 G  PP    P G    P+   GG 
Sbjct: 321 PPGTQAPPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPPLIPPPPGTSAPPMPPWGGG 380

Query: 391 ---GXEGXFFXPPXXXKFXPPPLFXXGXXPP 474
              G  G +  PP      PPP       PP
Sbjct: 381 AYSGWGGGYAPPPPPPCAPPPPALSLSQPPP 411


>AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p
           protein.
          Length = 222

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 4/91 (4%)
 Frame = +1

Query: 214 PPGIX-PXXGPPKXKXLWSXXXXXXXXXXXXXVGXXGKXPPXFKXPVGGWGAPL*XXGGX 390
           PPG   P   PP      S                 G  PP    P G    P+   GG 
Sbjct: 126 PPGTQAPPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPPLIPPPPGTSAPPMPPWGGG 185

Query: 391 ---GXEGXFFXPPXXXKFXPPPLFXXGXXPP 474
              G  G +  PP      PPP       PP
Sbjct: 186 AYSGWGGGYAPPPPPPCAPPPPALSLSQPPP 216


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 4/91 (4%)
 Frame = +1

Query: 214 PPGIX-PXXGPPKXKXLWSXXXXXXXXXXXXXVGXXGKXPPXFKXPVGGWGAPL*XXGGX 390
           PPG   P   PP      S                 G  PP    P G    P+   GG 
Sbjct: 691 PPGTQAPPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPPLIPPPPGTSAPPMPPWGGG 750

Query: 391 ---GXEGXFFXPPXXXKFXPPPLFXXGXXPP 474
              G  G +  PP      PPP       PP
Sbjct: 751 AYSGWGGGYAPPPPPPCAPPPPALSLSQPPP 781


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,316,980
Number of Sequences: 53049
Number of extensions: 182552
Number of successful extensions: 346
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)