Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F11
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2 ...    44   1e-04
Z36753-1|CAA85340.2|  193|Caenorhabditis elegans Hypothetical pr...    38   0.013
Z36753-2|CAE48510.1|  163|Caenorhabditis elegans Hypothetical pr...    31   1.5  

>AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2
           protein.
          Length = 189

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
 Frame = +1

Query: 121 DFRKXKLLHVXXXXFXXNGXGIIDKKDFELAIERISKSRGWSAGDAQYKEVQXTLLKVWD 300
           +F + K  H     F  +  G+I+ KDF+  IE I + RG  +    +   +  L  +W 
Sbjct: 10  EFLESKWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRRSD--FFMTARLCLPDIWQ 67

Query: 301 GLSXA-XXDXXGQXSKEEWISLWE---KFXXXPSXWXNLXXKFIFQXEDXSNXGXIXXEE 468
            ++ A   +     +  +WI L +   K    P+ W     +++F+  D S    +   E
Sbjct: 68  KMTEAIGKEEEDIITLSDWIQLCQSSRKSVREPA-WQKAYVEYMFKLLDESGDHLVDQAE 126

Query: 469 FSXVXAXFGLXKXEXXXXFXK---XXKGK--XXVXXXEXXELXKEFXXXEDVXXPGXFVX 633
           +  V   FG+ + +    F +     +G+    +   +   L K+F   ED   PG ++ 
Sbjct: 127 YVQVLGYFGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSEDPSSPGNWLL 186

Query: 634 GK 639
           GK
Sbjct: 187 GK 188


>Z36753-1|CAA85340.2|  193|Caenorhabditis elegans Hypothetical
           protein T09A5.1a protein.
          Length = 193

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
 Frame = +1

Query: 121 DFRKXKLLHVXXXXFXXNGXGIIDKKDFELAIERISKSRGWSAGDAQYKEVQXTLLKVWD 300
           +F + K  H     F  +  G+I+ KDF+  IE I + RG  +    +   +  L  +W 
Sbjct: 10  EFLESKWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRRSD--FFMTARLCLPDIWQ 67

Query: 301 GLSXA-XXDXXGQXSKEEWISLWE---KFXXXPSXWXNLXXKFIFQXED----XSNXGXI 456
            ++ A   +     +  +WI L +   K    P+ W     +++F+  D     S    +
Sbjct: 68  KMTEAIGKEEEDIITLSDWIQLCQSSRKSVREPA-WQKAYVEYMFKLLDESVSFSGDHLV 126

Query: 457 XXEEFSXVXAXFGLXKXEXXXXFXK---XXKGK--XXVXXXEXXELXKEFXXXEDVXXPG 621
              E+  V   FG+ + +    F +     +G+    +   +   L K+F   ED   PG
Sbjct: 127 DQAEYVQVLGYFGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSEDPSSPG 186

Query: 622 XFVXGK 639
            ++ GK
Sbjct: 187 NWLLGK 192


>Z36753-2|CAE48510.1|  163|Caenorhabditis elegans Hypothetical
           protein T09A5.1b protein.
          Length = 163

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 8/143 (5%)
 Frame = +1

Query: 121 DFRKXKLLHVXXXXFXXNGXGIIDKKDFELAIERISKSRGWSAGDAQYKEVQXTLLKVWD 300
           +F + K  H     F  +  G+I+ KDF+  IE I + RG  +    +   +  L  +W 
Sbjct: 10  EFLESKWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRRSD--FFMTARLCLPDIWQ 67

Query: 301 GLSXA-XXDXXGQXSKEEWISLWE---KFXXXPSXWXNLXXKFIFQXED----XSNXGXI 456
            ++ A   +     +  +WI L +   K    P+ W     +++F+  D     S    +
Sbjct: 68  KMTEAIGKEEEDIITLSDWIQLCQSSRKSVREPA-WQKAYVEYMFKLLDESVSFSGDHLV 126

Query: 457 XXEEFSXVXAXFGLXKXEXXXXF 525
              E+  V   FG+ + +    F
Sbjct: 127 DQAEYVQVLGYFGVNRKDSSHCF 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,596,635
Number of Sequences: 27780
Number of extensions: 96258
Number of successful extensions: 135
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)