Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_F09
(884 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-08
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 51 5e-05
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 46 0.002
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 46 0.002
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.064
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.11
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 34 5.5
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 60.9 bits (141), Expect = 4e-08
Identities = 41/100 (41%), Positives = 49/100 (49%)
Frame = +3
Query: 402 RGEAVCVLGALPXPRSLTRXARSFGXGERYQXTQRX*YGYPQNQGITQERTCEQKAXKRX 581
R +C G +P PRSLTR ARSFG GERY+ T G E T + + +
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDTRKTLSKEEI 77
Query: 582 GTVKRPXXWXFSIGSXPLXSXXKXXXQVRGGETXRXIKIP 701
RP FSIGS PL S K Q+ GGET + K P
Sbjct: 78 ----RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDP 113
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 50.8 bits (116), Expect = 5e-05
Identities = 25/30 (83%), Positives = 25/30 (83%)
Frame = +2
Query: 467 VVRXXXAVSXHSKXVIRLSTESGDNAGKNM 556
VVR AVS HSK VIRLSTESGDNAGKNM
Sbjct: 30 VVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 45.6 bits (103), Expect = 0.002
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 378 CINESANARGEAVCVLGALPXPRSLTRXARSFGXGERYQ-XTQRX*YGYPQNQGITQ 545
CI + A AR EAV VL ALP RS TR RS G G + YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 45.6 bits (103), Expect = 0.002
Identities = 23/58 (39%), Positives = 23/58 (39%)
Frame = +1
Query: 706 FPXGXSXXALXXRXXXLXDXCXXFXLXEXWXFXIXXAVGIXXXCRLXXXXWGCVXKPP 879
FP AL R L D C F L E W F I AVGI CR W PP
Sbjct: 48 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPP 105
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3
Query: 612 FSIGSXPLXSXXKXXXQVRGGETXRXIK 695
FSIGS PL S K QVRGGET + K
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYK 43
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/43 (53%), Positives = 23/43 (53%)
Frame = -1
Query: 578 PFXGLLLTCSFLRYPLILWITVXXXXXXXXXXXXXERPSXASQ 450
P LLTCSF YPLILWITV ERPS ASQ
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 304 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 426
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 40.3 bits (90), Expect = 0.064
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 180 DPDMIRYIDEFGQTXXRMQ 236
DPDMIRYIDEFGQT RMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -2
Query: 430 APNTQTASPRALADSLMQ 377
APNTQTASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 588 VKRPXXWXFSIGSXPLXSXXKXXXQVRGGETXRXIK 695
V+ P FSIGS PL S K Q+ GGET + K
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYK 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,768,335
Number of Sequences: 1657284
Number of extensions: 6255362
Number of successful extensions: 10295
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10295
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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