BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_F06 (1462 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 5.5 AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 5.5 AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 25 7.3 AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 9.6 >AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein protein. Length = 373 Score = 25.0 bits (52), Expect = 5.5 Identities = 13/35 (37%), Positives = 14/35 (40%) Frame = +2 Query: 833 PTTTTTXXXRXKRPRPXDXXPNXTXPPANGRPPTG 937 PTTTTT P P+ P PPTG Sbjct: 259 PTTTTTTDYTTAYPPTTSEPPSTPHPTDPHCPPTG 293 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 25.0 bits (52), Expect = 5.5 Identities = 28/94 (29%), Positives = 31/94 (32%) Frame = +1 Query: 64 KGFRXXRGGXGXRGTQGXPXXXKSXXXPRPXXKGAGDAGTAPPQRXKAHPNXXXNXPPXX 243 +G + RGG G RG G P S P GD GT P P + P Sbjct: 115 RGPKGERGGMGDRGDPGLPG---SLGYPGE----KGDLGTPGP------PGYPGDVGPKG 161 Query: 244 PPXPXTXXQPAAXPXGAGPXPPXGXXXXPGPPXD 345 P P PA P G G PG D Sbjct: 162 EPGP---KGPAGHPGAPGRPGVDGVKGLPGLKGD 192 >AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP protein. Length = 151 Score = 24.6 bits (51), Expect = 7.3 Identities = 16/55 (29%), Positives = 18/55 (32%) Frame = +1 Query: 187 PPQRXKAHPNXXXNXPPXXPPXPXTXXQPAAXPXGAGPXPPXGXXXXPGPPXDTP 351 PP+ + P N PP P P GP PP P PP P Sbjct: 71 PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRP-PPMMVP 124 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 24.2 bits (50), Expect = 9.6 Identities = 19/92 (20%), Positives = 22/92 (23%), Gaps = 2/92 (2%) Frame = +1 Query: 145 PRPXXKGAGDAGTAPPQRXKAHPNXXXNXPPXXPPXPXTXXQPAAXPXGAGPXP--PXGX 318 PRP G P R + P P P P + P P P P Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNP 271 Query: 319 XXXPGPPXDTPXTXXXAXQXPATAGXPHSTTP 414 P P + G P P Sbjct: 272 MGGPRPQISPQNSNLSGGMPSGMVGPPRPPMP 303 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.305 0.128 0.414 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 735,676 Number of Sequences: 2352 Number of extensions: 11794 Number of successful extensions: 27 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 563,979 effective HSP length: 67 effective length of database: 406,395 effective search space used: 170279505 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 43 (21.9 bits)
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