Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_F05
(866 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 153 7e-36
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 131 3e-29
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 128 2e-28
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 112 1e-23
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 106 8e-22
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 105 2e-21
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 102 1e-20
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 98 2e-19
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 95 2e-18
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 95 3e-18
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 85 3e-15
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 83 9e-15
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 70 7e-11
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 68 3e-10
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 61 3e-08
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 58 4e-07
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 2.3
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 153 bits (370), Expect = 7e-36
Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = +1
Query: 79 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 258
DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+
Sbjct: 4 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSL 63
Query: 259 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXXXXXXXTF 438
SR+ R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT + TF
Sbjct: 64 SRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTF 123
Query: 439 DQLALRAPTGKKTVLVQGQRNAREAVRHFG--PGS 537
DQLAL +P G TVL+ G R RE RHFG PG+
Sbjct: 124 DQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGT 158
Score = 37.1 bits (82), Expect = 0.58
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 533 APGAPRSHTKPYVRTKGHE 589
APG P SHTKPYVR+KG +
Sbjct: 155 APGTPHSHTKPYVRSKGRK 173
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 131 bits (316), Expect = 3e-29
Identities = 66/148 (44%), Positives = 90/148 (60%)
Frame = +1
Query: 91 KHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLA 270
+H R RT KS ++ T+A FN++VL+ LF+S+INRPP+SVSR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 271 RHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXXXXXXXTFDQLA 450
R +K+ VVVGTVT+D R+++ PK TVAAL T T DQLA
Sbjct: 69 RALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLA 128
Query: 451 LRAPTGKKTVLVQGQRNAREAVRHFGPG 534
+RAP G+ T++++G RN+REAVRHFG G
Sbjct: 129 VRAPKGQNTLILRGPRNSREAVRHFGMG 156
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 128 bits (309), Expect = 2e-28
Identities = 66/145 (45%), Positives = 91/145 (62%)
Frame = +1
Query: 97 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 276
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 277 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXXXXXXXTFDQLALR 456
M+ +EG I VVVG VT+D+R+Y +P + V AL TE TFDQLALR
Sbjct: 68 MQ--GKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 457 APTGKKTVLVQGQRNAREAVRHFGP 531
P TVL++G +NAREAV+HFGP
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGP 149
Score = 37.1 bits (82), Expect = 0.58
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 533 APGAPRSHTKPYVRTKGHE 589
APG P SHTKPYVR+KG +
Sbjct: 150 APGVPHSHTKPYVRSKGRK 168
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 112 bits (270), Expect = 1e-23
Identities = 57/125 (45%), Positives = 78/125 (62%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 364 TVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPGSRS 543
+ AL VT + TFDQLAL++P G+ TVL+QG ++ + R S
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMERKRKVSSHP 128
Query: 544 TALSH 558
H
Sbjct: 129 DVTEH 133
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 106 bits (254), Expect = 8e-22
Identities = 61/150 (40%), Positives = 82/150 (54%)
Frame = +1
Query: 79 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 258
D++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 4 DLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVST 63
Query: 259 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXXXXXXXTF 438
S+LA MKK E AV V TVT D R Y +PKM V AL T+ F
Sbjct: 64 SKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRF 120
Query: 439 DQLALRAPTGKKTVLVQGQRNAREAVRHFG 528
D+LAL+APTG+KTVL++G+RN REA++HFG
Sbjct: 121 DELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 105 bits (251), Expect = 2e-21
Identities = 54/114 (47%), Positives = 74/114 (64%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 364 TVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 525
+V AL VTE TFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF 151
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 102 bits (244), Expect = 1e-20
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 10/130 (7%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 345
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 346 YKIPKMTVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 525
+IP M V AL ++ TFDQLA+ APTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
Query: 526 G----PGSRS 543
G PGS S
Sbjct: 160 GASGVPGSHS 169
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 98.3 bits (234), Expect = 2e-19
Identities = 50/115 (43%), Positives = 69/115 (60%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 364 TVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 528
V AL TE TFDQLALR PTGK +L++G AR A +HFG
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFG 208
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 95.1 bits (226), Expect = 2e-18
Identities = 58/146 (39%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +1
Query: 100 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 279
RKV R E KS + T F +++ +RL +S+ NRP +SVSRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 280 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXXXXXXXTFDQLALRA 459
K RE IAVV TVTND RL IP+MT+ AL + +FD+L
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEK 129
Query: 460 PTGKKTVLVQGQRNAREAVRHFG-PG 534
PTG VL+QG+R+ R + FG PG
Sbjct: 130 PTGDNCVLLQGRRSCRAVCKKFGSPG 155
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 94.7 bits (225), Expect = 3e-18
Identities = 52/115 (45%), Positives = 69/115 (60%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+++FN VLRRL +R R PISVSRL + + + VVVGTVT+D RL +PK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 364 TVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 528
V AL TE TFDQLA + PTG T+L++G + REA++HFG
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFG 368
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 84.6 bits (200), Expect = 3e-15
Identities = 51/115 (44%), Positives = 66/115 (57%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T++ FN VLRRL +R R PISVSRL + + + VVVGTVT+DVRL +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 364 TVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 528
V TE TFDQLA + PTG T+L++G R RE ++HFG
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFG 444
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 83.0 bits (196), Expect = 9e-15
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +1
Query: 238 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXX 417
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 418 XXXXXTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 525
TFDQLAL +P TVL+ G R RE HF
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHF 188
Score = 33.1 bits (72), Expect = 9.4
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 533 APGAPRSHTKPYVRTKGHE 589
A G P SHTKPYVR+KG +
Sbjct: 191 ALGTPHSHTKPYVRSKGRK 209
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 70.1 bits (164), Expect = 7e-11
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +1
Query: 79 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 258
DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+++
Sbjct: 113 DIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLAL 172
Query: 259 SRL 267
SR+
Sbjct: 173 SRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/98 (35%), Positives = 57/98 (58%)
Frame = +1
Query: 100 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 279
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 280 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEK 393
++G I VV+G+VT+D+R+Y++ + V L T++
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKR 107
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/98 (35%), Positives = 57/98 (58%)
Frame = +1
Query: 100 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 279
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 280 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEK 393
++G I VV+G+VT+D+R+Y++ + V L T++
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKR 107
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +1
Query: 244 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKXXXXXXXXXX 423
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 424 XXXTFDQLALRAPTGKKTVLVQGQRN 501
+FDQLA+ +P G + QG R+
Sbjct: 107 KILSFDQLAMTSPKGPQK-CYQGYRH 131
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1
Query: 331 NDVRLYKIPKMTVAALHVTEKXXXXXXXXXXXXXTFDQLALRAPTGKKTVLVQGQRNARE 510
+D R+ +PK++V AL VTE TFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 511 AVRHF 525
AV+HF
Sbjct: 185 AVKHF 189
Score = 56.4 bits (130), Expect = 9e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +1
Query: 184 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 363
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 364 TVAALHVT 387
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 265 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 378
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 33.1 bits (72), Expect = 9.4
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = -1
Query: 410 KMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIGGRLI 234
K+ + A +V +AA V FG + S VTVPTTT + + F +TE GG LI
Sbjct: 8 KISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETGGSLI 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,729,466
Number of Sequences: 1657284
Number of extensions: 13076262
Number of successful extensions: 30100
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30067
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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