Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F05
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   3.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -1

Query: 371 ATVIFGILYSLTSFVTVPTTTAIKPSRVGFF---MWRAKRDTEIGGRLIRLIKSRRR 210
           +T I  I + +   VTV  T A+K S++  F   M R     +  G  I  ++ +RR
Sbjct: 76  STAILEIAFEVIFIVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRR 132


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 180 SGQVSVKLYK*PQVNILRFNFGAPNFPVVFMIDVKYPS*QTKKKKTNLKEFPIVN 16
           S Q S+ + +  QV +L+ N    +      ID+   + Q    K +LK + +VN
Sbjct: 303 SHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVN 357


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 180 SGQVSVKLYK*PQVNILRFNFGAPNFPVVFMIDVKYPS*QTKKKKTNLKEFPIVN 16
           S Q S+ + +  QV +L+ N    +      ID+   + Q    K +LK + +VN
Sbjct: 303 SHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVN 357


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 180 SGQVSVKLYK*PQVNILRFNFGAPNFPVVFMIDVKYPS*QTKKKKTNLKEFPIVN 16
           S Q S+ + +  QV +L+ N    +      ID+   + Q    K +LK + +VN
Sbjct: 303 SHQASLNIARRVQVTLLQVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVN 357


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -1

Query: 359 FGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDT--EIGGRLIRLIKSRRRTI 204
           F I Y     VT+ T  A + +  G F+W  + D   E  G    L+K+  + I
Sbjct: 322 FWIGYDNEQSVTIKTEYAKEKNLAGVFIWSIETDDMHEFCGEKNGLLKAVNKAI 375


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -2

Query: 559 SVRARCSWSQGQSDALPHEHFADLVPVLSSCQSEHEEPADQK*EXLLQQP 410
           S +  C+ S+G S   P +   +L+  L   Q+E+E P+++  + ++ QP
Sbjct: 300 SEKTLCNGSKGIS---PEQE--ELIHRLVYFQNEYEHPSEEDVKRIINQP 344


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 47  FFFLVCQDGYLTSIINTTGKFGAPKLNLK 133
           FFF +C D     ++N    F   ++N K
Sbjct: 76  FFFAICCDFIALIVVNIVHVFRKRRVNYK 104


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -3

Query: 303 QTLTSWLLHVARQTRHRDWW 244
           QTL  WL H        DW+
Sbjct: 658 QTLAMWLNHNPNYAEVTDWY 677


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,695
Number of Sequences: 336
Number of extensions: 3323
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)