Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F04
         (834 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QAD1 Cluster: ENSANGP00000013502; n=2; Coelomata|Rep:...    73   1e-11
UniRef50_Q1HR98 Cluster: Signal peptidase subunit; n=5; Endopter...    71   3e-11
UniRef50_Q09JH8 Cluster: Microsomal signal peptidase subunit; n=...    69   1e-10
UniRef50_A7SCR5 Cluster: Predicted protein; n=1; Nematostella ve...    67   4e-10
UniRef50_Q9VAL0 Cluster: Signal peptidase complex subunit 1; n=2...    64   3e-09
UniRef50_Q499B2 Cluster: Zgc:110014; n=10; Coelomata|Rep: Zgc:11...    62   1e-08
UniRef50_Q9Y6A9 Cluster: Signal peptidase complex subunit 1; n=1...    58   2e-07
UniRef50_Q7Z0T9 Cluster: Signal peptidase 12kDa-like; n=1; Schis...    46   0.002
UniRef50_O44953 Cluster: Probable signal peptidase complex subun...    45   0.003
UniRef50_UPI0001555791 Cluster: PREDICTED: hypothetical protein;...    40   0.077
UniRef50_Q22GG9 Cluster: Putative uncharacterized protein; n=1; ...    39   0.13 
UniRef50_Q54Y83 Cluster: Putative uncharacterized protein; n=1; ...    38   0.31 
UniRef50_Q2H688 Cluster: Putative uncharacterized protein; n=3; ...    35   2.2  
UniRef50_Q1DTX0 Cluster: Predicted protein; n=5; Eurotiomycetida...    35   2.9  
UniRef50_Q1EVK7 Cluster: Peptidase M15B and M15C, D,D-carboxypep...    33   6.7  

>UniRef50_Q7QAD1 Cluster: ENSANGP00000013502; n=2; Coelomata|Rep:
           ENSANGP00000013502 - Anopheles gambiae str. PEST
          Length = 96

 Score = 72.5 bits (170), Expect = 1e-11
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +3

Query: 159 SIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYIL 296
           +I TH+D+ GQ +AEKL R IITLF  VG VWGYI+QQFSQ+VYIL
Sbjct: 3   NIQTHMDFEGQGRAEKLSRIIITLFGTVGLVWGYIIQQFSQTVYIL 48


>UniRef50_Q1HR98 Cluster: Signal peptidase subunit; n=5;
           Endopterygota|Rep: Signal peptidase subunit - Aedes
           aegypti (Yellowfever mosquito)
          Length = 97

 Score = 71.3 bits (167), Expect = 3e-11
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +3

Query: 159 SIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYIL 296
           +I TH+D+ GQ +AEKL R IITLF  VG +WGYI+QQFSQ++YIL
Sbjct: 3   NIATHMDFEGQGRAEKLSRVIITLFGAVGLIWGYIIQQFSQTMYIL 48


>UniRef50_Q09JH8 Cluster: Microsomal signal peptidase subunit; n=2;
           Arthropoda|Rep: Microsomal signal peptidase subunit -
           Argas monolakensis
          Length = 100

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 28/60 (46%), Positives = 42/60 (70%)
 Frame = +3

Query: 141 KMDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILGCRISACC 320
           ++ F  +IPTH+D+ GQ  AEK+++A+  +F+++G VWGYIVQQFS +V  LG      C
Sbjct: 3   EIPFLNTIPTHMDFEGQWMAEKIFQAVTVVFALIGLVWGYIVQQFSYTVITLGVGFVISC 62


>UniRef50_A7SCR5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 104

 Score = 67.3 bits (157), Expect = 4e-10
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +3

Query: 144 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYIL 296
           ++ F SIPTH+DY GQ  AEKL+  II  F + GF+WGY V+QF  +V IL
Sbjct: 3   LNIFKSIPTHLDYEGQKLAEKLFHIIIIFFGVAGFLWGYYVEQFGATVMIL 53


>UniRef50_Q9VAL0 Cluster: Signal peptidase complex subunit 1; n=2;
           Sophophora|Rep: Signal peptidase complex subunit 1 -
           Drosophila melanogaster (Fruit fly)
          Length = 98

 Score = 64.5 bits (150), Expect = 3e-09
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = +3

Query: 162 IPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILG 299
           I TH+D+ GQ KAE+  R IIT F IVG V+G  VQQFSQ+VYILG
Sbjct: 4   IQTHMDFAGQGKAERWSRFIITFFGIVGLVYGAFVQQFSQTVYILG 49


>UniRef50_Q499B2 Cluster: Zgc:110014; n=10; Coelomata|Rep:
           Zgc:110014 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 102

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 26/59 (44%), Positives = 40/59 (67%)
 Frame = +3

Query: 144 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILGCRISACC 320
           +  F SIPTH+DY GQ  AE++++ II + + +GF++G IVQQF  +VYI+    +  C
Sbjct: 2   LSMFKSIPTHMDYKGQKLAEQIFQGIILVSAAIGFIYGLIVQQFGWTVYIMLAGFTVSC 60


>UniRef50_Q9Y6A9 Cluster: Signal peptidase complex subunit 1; n=12;
           Eutheria|Rep: Signal peptidase complex subunit 1 - Homo
           sapiens (Human)
          Length = 102

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = +3

Query: 144 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILGCRISACC 320
           ++  +S+PT +DY GQ  AE++++ II   +IVGF++GY+ +QF  +VYI+    +  C
Sbjct: 2   LEHLSSLPTQMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSC 60


>UniRef50_Q7Z0T9 Cluster: Signal peptidase 12kDa-like; n=1;
           Schistosoma japonicum|Rep: Signal peptidase 12kDa-like -
           Schistosoma japonicum (Blood fluke)
          Length = 95

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = +3

Query: 171 HIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYIL--GCRISA 314
           ++D+ GQ KAEKL   +I  F I+ F  GY  QQ S SV IL  GC ++A
Sbjct: 17  YMDFAGQRKAEKLMNLMIVTFFIIAFPVGYYRQQLSDSVLILLVGCILTA 66


>UniRef50_O44953 Cluster: Probable signal peptidase complex subunit
           1; n=2; Caenorhabditis|Rep: Probable signal peptidase
           complex subunit 1 - Caenorhabditis elegans
          Length = 105

 Score = 44.8 bits (101), Expect = 0.003
 Identities = 19/47 (40%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 162 IPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVY-ILG 299
           + +HID+ GQ  AE+ Y+ I+T+  I+GF+ G+  QQ S +++ +LG
Sbjct: 15  LSSHIDFQGQKVAERTYQVILTIAGIIGFLVGFWTQQLSYAMFTVLG 61


>UniRef50_UPI0001555791 Cluster: PREDICTED: hypothetical protein;
           n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein - Ornithorhynchus anatinus
          Length = 177

 Score = 39.9 bits (89), Expect = 0.077
 Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +3

Query: 174 IDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQF--SQSVYILGCRIS 311
           +DY GQ  AE+++  II + +++GF+ GY V+ F  + S+++ G  IS
Sbjct: 6   MDYKGQELAEQIFMGIIQISAVIGFILGYWVEDFGWTISIFLSGLLIS 53


>UniRef50_Q22GG9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 90

 Score = 39.1 bits (87), Expect = 0.13
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 174 IDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVY--ILGC 302
           +D+V Q K E+ Y+ II   +++ F+  Y  Q+FS  VY  +L C
Sbjct: 17  MDFVSQKKTERYYKIIILTVAVISFIVSYFQQRFSTCVYSVLLAC 61


>UniRef50_Q54Y83 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 80

 Score = 37.9 bits (84), Expect = 0.31
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = +3

Query: 174 IDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVY 290
           +D+ GQ  AE +Y+  I +F ++G++ G+I Q FS + Y
Sbjct: 1   MDFEGQKLAEYIYQYTIIIFGVIGWIIGFIKQDFSITFY 39


>UniRef50_Q2H688 Cluster: Putative uncharacterized protein; n=3;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 102

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 174 IDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYI 293
           ID+ GQ   E L  A +TL   + F+ GY +Q    +VYI
Sbjct: 17  IDFEGQKLVELLVNAALTLVGAIAFLVGYFLQDIKLAVYI 56


>UniRef50_Q1DTX0 Cluster: Predicted protein; n=5;
           Eurotiomycetidae|Rep: Predicted protein - Coccidioides
           immitis
          Length = 102

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 174 IDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYI 293
           ID+ GQ  AE L   ++ LF  +GF+ GYI Q    +V I
Sbjct: 16  IDFHGQRLAEILSTVLLILFGAIGFIAGYIYQDIFITVLI 55


>UniRef50_Q1EVK7 Cluster: Peptidase M15B and M15C,
           D,D-carboxypeptidase VanY/endolysins precursor; n=2;
           Firmicutes|Rep: Peptidase M15B and M15C,
           D,D-carboxypeptidase VanY/endolysins precursor -
           Clostridium oremlandii OhILAs
          Length = 296

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +3

Query: 153 FTSIPTHIDYVGQAKAEKLYRAIITLFSIVG 245
           +T  P HI YVG+A AE++Y A ITL   +G
Sbjct: 264 YTYEPWHIRYVGKAVAEEIYNAGITLEEYLG 294


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,566,349
Number of Sequences: 1657284
Number of extensions: 8697724
Number of successful extensions: 19851
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19845
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)