Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_F04
(834 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase comple... 58 3e-08
L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa su... 56 1e-07
U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein p... 30 9.0
U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein... 30 9.0
U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein p... 30 9.0
BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting p... 30 9.0
BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting p... 30 9.0
BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting p... 30 9.0
BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein. 30 9.0
AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive p... 30 9.0
AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive p... 30 9.0
>BC000884-1|AAH00884.1| 104|Homo sapiens signal peptidase complex
subunit 1 homolog (S. cerevisiae) protein.
Length = 104
Score = 58.4 bits (135), Expect = 3e-08
Identities = 23/59 (38%), Positives = 40/59 (67%)
Frame = +3
Query: 144 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILGCRISACC 320
++ +S+PT +DY GQ AE++++ II +IVGF++GY+ +QF +VYI+ + C
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSC 60
>L38852-1|AAL31361.1| 102|Homo sapiens signal peptidase 12kDa
subunit protein.
Length = 102
Score = 56.4 bits (130), Expect = 1e-07
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +3
Query: 144 MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILGCRISACC 320
++ +S+PT +DY GQ AE++++ I +IVGF++GY+ +QF +VYI+ + C
Sbjct: 2 LEHLSSLPTQMDYKGQKLAEQMFQGIYLFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSC 60
>U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein
protein.
Length = 513
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein
protein.
Length = 461
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 244
>U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein
protein.
Length = 482
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 215 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 265
>BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 461
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 194 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 244
>BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 190 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 240
>AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 246 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 296
>AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive
protein, 60kDa isoform 3 variant protein.
Length = 448
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 251 YKTNYTEQCNYCPV*FLC-FCLSDVIYVGWYRCKEIHLAKLD*YHLPQQQIILK 93
Y + Y ++ PV +LC FCL Y +C + HL K D H P +I K
Sbjct: 181 YFSPYPQELTTLPVLYLCEFCLK---YGRSLKCLQRHLTKCDLRHPPGNEIYRK 231
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,296,337
Number of Sequences: 237096
Number of extensions: 1277068
Number of successful extensions: 2719
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2719
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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