Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E24
         (905 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6CCB Cluster: PREDICTED: hypothetical protein;...    34   5.7  
UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;...    34   5.7  
UniRef50_Q75JU4 Cluster: Similar to Volvox carteri f. nagariensi...    34   5.7  

>UniRef50_UPI0000DB6CCB Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 394

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 514 PPPPPXXXXKXXXXXXXXPXPPXXXXXPXPXXXXXPPXLPXXP 386
           PPPPP             P PP     P P     PP LP  P
Sbjct: 234 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLPPPP 276



 Score = 33.9 bits (74), Expect = 5.7
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 514 PPPPPXXXXKXXXXXXXXPXPPXXXXXPXPXXXXXPPXLPXXP 386
           PPPPP             P PP     P P     PP LP  P
Sbjct: 244 PPPPPPPPPPPPPPPPPPPPPPPPPPPPLPPPPPPPPPLPPPP 286


>UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;
           Volvox carteri f. nagariensis|Rep: Pherophorin-dz1
           protein precursor - Volvox carteri f. nagariensis
          Length = 1009

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 514 PPPPPXXXXKXXXXXXXXPXPPXXXXXPXPXXXXXPPXLPXXP 386
           PPPPP             P PP     P P     PP LP  P
Sbjct: 637 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLPPSP 679


>UniRef50_Q75JU4 Cluster: Similar to Volvox carteri f. nagariensis.
           Pherophorin-dz1 protein; n=2; Dictyostelium
           discoideum|Rep: Similar to Volvox carteri f.
           nagariensis. Pherophorin-dz1 protein - Dictyostelium
           discoideum (Slime mold)
          Length = 243

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 514 PPPPPXXXXKXXXXXXXXPXPPXXXXXPXPXXXXXPPXLPXXP 386
           PPPPP             P PP     P P     PP LP  P
Sbjct: 64  PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLPPPP 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,483,597
Number of Sequences: 1657284
Number of extensions: 2192428
Number of successful extensions: 10510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7216
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)