Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E23
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   7.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   7.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 155 DKPTTKPICEQAFGNSGPCFAYIKLYS 235
           +KP   P+C++ F  S     +++ +S
Sbjct: 47  EKPFRCPVCDRRFSQSSSVTTHMRTHS 73


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 155 DKPTTKPICEQAFGNSGPCFAYIKLYS 235
           +KP   P+C++ F  S     +++ +S
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTHS 329


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 348 ISYFMHFCSHSANVMKRLSFPW 283
           IS+F++F  H  N   R  + W
Sbjct: 146 ISFFLNFMLHCNNTTWRCLYRW 167


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query: 183 SRLLAIRALVSPTLSYTR-TIRRRRSVKNSFT-EAARGT 293
           +RLL +    SP+  +TR  I+RR   +++ T    RGT
Sbjct: 254 NRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGT 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,495
Number of Sequences: 336
Number of extensions: 1537
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)