Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E23
         (933 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0580 + 4745639-4746528,4746666-4746747                           29   5.3  
11_04_0329 - 16442298-16443734                                         29   7.0  

>12_01_0580 + 4745639-4746528,4746666-4746747
          Length = 323

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 82  VMLRIGAFPNHGLSLRCVLDVSHE**ANNEADMRAGFWQFGPLFRLH 222
           V + +GA+P H L LRCV ++S E       +++A  W      RLH
Sbjct: 277 VFITVGAYPGHRLQLRCV-ELSRE----KFGEVKARVWWEENKARLH 318


>11_04_0329 - 16442298-16443734
          Length = 478

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +3

Query: 87  VAXRCFS*PRAFSSLRAXXXXXXXXXXXXXYASRLLAIRALVSPTLSYTRTIRRRRSVKN 266
           +A RC + PRA +++ A              ASRLLA  A +SP  +  R +       N
Sbjct: 24  LADRCAT-PRALAAVHAAMLVSGRLADDAFAASRLLAAHAALSPPGAVLRLLASLPCAPN 82

Query: 267 SF 272
           SF
Sbjct: 83  SF 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,133,436
Number of Sequences: 37544
Number of extensions: 155732
Number of successful extensions: 360
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)