Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E23
         (933 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)              69   7e-12
SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28)            61   1e-09
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)               58   1e-08
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                53   3e-07
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   5e-07
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   7e-07
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                50   3e-06
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)                   47   2e-05
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.002
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)               41   0.002
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.035

>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1120

 Score = 68.5 bits (160), Expect = 7e-12
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = +2

Query: 200 SGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKC 334
           +GPC AY + + Y Q ++KC++F+YGGCQGN N F + AECE+KC
Sbjct: 231 TGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKAECEKKC 275


>SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28)
          Length = 65

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +2

Query: 203 GPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKC 334
           GPC AY+  + +  + K+C+EFIYGGC GN+NRF T  EC++ C
Sbjct: 19  GPCKAYMPRFYFEIEKKECQEFIYGGCGGNENRFFTKRECQRIC 62


>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2101

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 28/71 (39%), Positives = 42/71 (59%)
 Frame = +2

Query: 128 AACLTSVMSDKPTTKPICEQAFGNSGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFI 307
           AACL      K + K IC+     +G C  ++ LY +   +  CE+F Y GC+GN NRF 
Sbjct: 670 AACLK-----KCSAKEICDLP-AEAGSCDGHMPLYFHNSTSGLCEKFHYSGCEGNANRFP 723

Query: 308 TLAECEQKCIK 340
           T+ +C++KC+K
Sbjct: 724 TMRKCQRKCMK 734



 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +2

Query: 200 SGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKC 334
           +GPC A    + Y  ++ +C+ F YGGCQGN N F + A C +KC
Sbjct: 632 TGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKAACLKKC 676



 Score = 35.5 bits (78), Expect = 0.062
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 203 GPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKCI 337
           G  FA+   + Y    + CE F+Y G  GN N F     C++ C+
Sbjct: 212 GTGFAFKVHFFYNAAKRLCEPFVYSGMGGNKNNFKDKDACQRACM 256


>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 3804

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 19/46 (41%), Positives = 32/46 (69%)
 Frame = +2

Query: 203  GPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKCIK 340
            G C A + ++ Y ++T +C+ F YGGC GN NRF +  +C+++C+K
Sbjct: 2129 GRCRARMVMWFYNKRTGRCQTFNYGGCGGNGNRFRSRRQCQRRCVK 2174


>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2641

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 26/88 (29%), Positives = 41/88 (46%)
 Frame = +2

Query: 71   ESXXSCCXSVLFLTTGFLFAACLTSVMSDKPTTKPICEQAFGNSGPCFAYIKLYSYXQKT 250
            E+   C   V     G   A C      + P T  +CE+ +  S  C +++  +S+  +T
Sbjct: 2342 ENGGKCVDGVCQCPAGHTGANC-----QEDPATDSVCERMW-QSPKCTSHLPKFSFNSQT 2395

Query: 251  KKCEEFIYGGCQGNDNRFITLAECEQKC 334
             +C++  Y GC GN N F T  EC+  C
Sbjct: 2396 GQCQQLAYNGCLGNLNNFDTAEECQNTC 2423


>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 487

 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 24/60 (40%), Positives = 32/60 (53%)
 Frame = +2

Query: 161 PTTKPICEQAFGNSGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKCIK 340
           P    IC+     +GPC A +  + Y  K  +C  FIYGGC GN N F T  EC+  C++
Sbjct: 19  PDWSVICKMPAA-AGPCRAAMPQWYYNFKRHRCIRFIYGGCGGNPNNFDTKNECKSACMR 77


>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 4002

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +2

Query: 203  GPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKCI 337
            G C A + ++ Y +K  +C  F YGGC GN NRF T   CE++C+
Sbjct: 2061 GRCRALMWMWYYNKKKGRCIRFAYGGCGGNPNRFKTKKACERRCM 2105


>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
          Length = 750

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 200 SGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKCIK 340
           +GPC      + Y      C EF+YGGC GN N+F + +EC + C +
Sbjct: 508 TGPCRGAFPKWYYSTADNACHEFLYGGCGGNANKFDSKSECLEVCYR 554


>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1338

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = +2

Query: 200  SGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFIT 310
            +GPC A I+ + Y  K  KC+ F++GGC  N N F T
Sbjct: 1240 AGPCMASIERFYYNAKIGKCQSFVFGGCLPNGNNFKT 1276


>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1822

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 257 CEEFIYGGCQGNDNRFITLAECEQKC 334
           C+ F+Y GC GN NRF+T  +CE  C
Sbjct: 238 CKPFVYSGCGGNTNRFVTKRKCEAFC 263


>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3261

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 200  SGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKC 334
            +G C  +   + Y     KC  F+Y GC GN+N F+   +C + C
Sbjct: 3162 TGSCSRFTVRWFYDTNRGKCAPFVYTGCGGNENNFMNEQKCLETC 3206


>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1286

 Score = 36.3 bits (80), Expect = 0.035
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 179 CEQAFGNSGPCFAYIKLYSYXQKTKKCEEFIYGGCQGNDNRFITLAECEQKCI 337
           CE+ +       + ++ Y Y   +++C++  + GC GN N F T+  C + CI
Sbjct: 568 CEKIWAPDSCASSEMRAY-YDVTSRQCKQTEFWGCNGNHNLFSTVDSCSKTCI 619


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,576,085
Number of Sequences: 59808
Number of extensions: 193046
Number of successful extensions: 444
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2717121828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)