Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E22
         (871 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   1.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   8.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.5  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +3

Query: 381 VSDNEI---SSKFVKLFRGLKDVKDLINE 458
           +SD +I   SSK +K F   K +K+++NE
Sbjct: 107 ISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 324 ECGAVGHCTATVWEK 368
           E G +GHCTA+V ++
Sbjct: 310 ERGELGHCTASVMDE 324


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 390 NEISSKFVKLFRGLKDVKDL 449
           N+I   +V  F+G+ DVKD+
Sbjct: 278 NDILRPYVPEFKGVLDVKDV 297


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 390 NEISSKFVKLFRGLKDVKDL 449
           N+I   +V  F+G+ DVKD+
Sbjct: 193 NDILRPYVPEFKGVLDVKDV 212


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 390 NEISSKFVKLFRGLKDVKDL 449
           N+I   +V  F+G+ DVKD+
Sbjct: 512 NDILRPYVPEFKGVLDVKDV 531


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 273 PSVLVAQTTNLYNKGTLETVDKQQTCLSSLRM*FKFNTPALI 148
           PS+    TT+  ++ T++T+  Q +   +  M ++   PALI
Sbjct: 393 PSLYPMATTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALI 434


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 704 KIRCTWG-PSYWCSNFSTGRECNATPHCINRVWSKMT 811
           KIR   G P Y C+     + CN    CINRV  + T
Sbjct: 462 KIRVPPGTPIYECN-----KRCNCDIDCINRVVQRGT 493


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,766
Number of Sequences: 438
Number of extensions: 5902
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)