Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_E21
(965 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.020
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.020
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.18
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 31 0.32
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.74
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.74
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 29 1.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.3
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 3.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.0
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 9.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 41/158 (25%), Positives = 42/158 (26%), Gaps = 2/158 (1%)
Frame = +1
Query: 469 PAPGLSVAATGXTXPKGGXTGXPQTXGXPQXKXCDQXAXXXPXPXKRPXXXR-FXKXPPP 645
P P SVAA P P G P A P P P + PP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 646 PXPPXXKXXPSXS-XGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFPXPLPXXPXIXXXP 822
P P P S P P P P PP P P P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS----VGVP 1208
Query: 823 XFSPPSGEXXCPLFSLXPXAXXGPSPXSRXXXXXXPXP 936
PPS P P A P P P P
Sbjct: 1209 PVPPPSTAPPVP----TPSAGLPPVPVPTAKAPPVPAP 1242
Score = 36.7 bits (81), Expect = 0.005
Identities = 38/147 (25%), Positives = 41/147 (27%), Gaps = 1/147 (0%)
Frame = +2
Query: 497 PVSPXPKXVXPVXPKLXGXPXXXXVTKXPXKXPXPXKGRVXXVXPXGPPPPXHPSXXPXP 676
P P P PV P G P + P P P G PP PS P
Sbjct: 1074 PSIPAPSGAPPV-PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Query: 677 PXXXVXXPP-PRXFXXSPGXFPPXKXXXXXXXXXXXXXXXXXXPXSPXSPPFPPXPXKXX 853
PP P+ +P P P S PP P K
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPS------GAPPVPKPSVAAPPVPAPSSGIPPVP-KPA 1185
Query: 854 APFSP*XPPXXXXPXPXPGXXGPXPPP 934
A P PP P P P P PP
Sbjct: 1186 AGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 35.1 bits (77), Expect = 0.015
Identities = 40/160 (25%), Positives = 41/160 (25%), Gaps = 4/160 (2%)
Frame = +2
Query: 497 PVSPXPKXVXPVXPKLXGXPXXXXVTKXPXKXPXPXKGRVXXVXPXGPPPPXHPSXXPXP 676
P P P PV G P P P P P G PP PS P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAP------SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 677 PXXXVXXPP-PRXFXXSPGXFPPXKXXXXXXXXXXXXXXXXXXPXSPXSPP---FPPXPX 844
P V PP P+ P P P P PP P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 845 KXXAPFSP*XPPXXXXPXPXPGXXGPXPPPXXLGXXXSXP 964
AP P P P P P P P G P
Sbjct: 1155 PSGAPPVP-KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 35.1 bits (77), Expect = 0.015
Identities = 33/122 (27%), Positives = 39/122 (31%), Gaps = 13/122 (10%)
Frame = +1
Query: 637 PPPPXPPXXKXXPSXSXGXXTPPPXL----XXIPXXFPPXXXPPXXAP--LPXFPXPLPX 798
PP P P P S G + PP + IP P PP AP +P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 799 XPXI----XXXPXFSPPSGEXXCPLFSLXPXAXXGPS---PXSRXXXXXXPXPXXGGXXX 957
P + P PSG P S+ PS P + P P G
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 958 PP 963
P
Sbjct: 1161 VP 1162
Score = 34.7 bits (76), Expect = 0.020
Identities = 37/157 (23%), Positives = 42/157 (26%), Gaps = 2/157 (1%)
Frame = +2
Query: 470 LPPXFRLRQPVSPXPKXVXPVXP--KLXGXPXXXXVTKXPXKXPXPXKGRVXXVXPXGPP 643
LP L P S PK P P K + + P K + P
Sbjct: 973 LPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAP 1032
Query: 644 PPXHPSXXPXPPXXXVXXPPPRXFXXSPGXFPPXKXXXXXXXXXXXXXXXXXXPXSPXSP 823
P PS P P P P+ +P PP P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 824 PFPPXPXKXXAPFSP*XPPXXXXPXPXPGXXGPXPPP 934
P P AP P P P P P P P P
Sbjct: 1093 PVP--KPSVAAPPVP-KPSVAVPPVPAPSGAPPVPKP 1126
Score = 33.5 bits (73), Expect = 0.046
Identities = 34/130 (26%), Positives = 37/130 (28%), Gaps = 7/130 (5%)
Frame = +1
Query: 472 APGLSVAATGXTXPKGGXTGXP--QTXGXPQXKXCDQXAXXXPXPXKR--PXXXRFXKXP 639
AP + V + PK P G P A P P P P
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 640 PPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAP---LPXFPXPLPXXPXI 810
P P P P S G PP P P PP P P P P P +
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSV 1249
Query: 811 XXXPXFSPPS 840
P S PS
Sbjct: 1250 -STPRSSVPS 1258
Score = 32.7 bits (71), Expect = 0.080
Identities = 34/145 (23%), Positives = 35/145 (24%)
Frame = +2
Query: 497 PVSPXPKXVXPVXPKLXGXPXXXXVTKXPXKXPXPXKGRVXXVXPXGPPPPXHPSXXPXP 676
P P P P P G P + P P PP PS P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 677 PXXXVXXPPPRXFXXSPGXFPPXKXXXXXXXXXXXXXXXXXXPXSPXSPPFPPXPXKXXA 856
P V PP S G P K S PP PP
Sbjct: 1162 PKPSVAAPPVP--APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 857 PFSP*XPPXXXXPXPXPGXXGPXPP 931
P P P P P P P
Sbjct: 1220 P----TPSAGLPPVPVPTAKAPPVP 1240
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.020
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +3
Query: 636 APPPXXTXXKXPXLXXXXXPXPPPGTXKXPXXFSPLXXPPPPXPPPXFPXPPXRXTRXXP 815
APP + + P PPP P S P PPP P P + P
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 816 -XPXLFPPXRXXXXPP 860
P PP PP
Sbjct: 189 SLPSAVPPMPPKVPPP 204
Score = 32.3 bits (70), Expect = 0.11
Identities = 30/133 (22%), Positives = 35/133 (26%), Gaps = 5/133 (3%)
Frame = +1
Query: 580 AXXXPXPXKRPXXXRFXKXPPPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXP-- 753
A P P + PP PP P P IP PP P
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Query: 754 PXXAP--LPXFPXPL-PXXPXIXXXPXFSPPSGEXXCPLFSLXPXAXXGPSPXSRXXXXX 924
P +P P P + P P + P P S P A P+ S
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFP 239
Query: 925 XPXPXXGGXXXPP 963
P PP
Sbjct: 240 NRGPSIPSASVPP 252
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +3
Query: 702 PPGTXKXPXXFSPLXXPPPPXPPPXFPXPPXRXTRXXPXPXLFPPXRXXXXPPFLP-XPX 878
PP P S L PP PP PP P P PP PP P P
Sbjct: 124 PPSAPAPPTPQSELR--PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 879 RXXXXLXXXPGXXXPXP 929
+ P P P
Sbjct: 182 KSPPSAPSLPSAVPPMP 198
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.020
Identities = 31/120 (25%), Positives = 33/120 (27%), Gaps = 7/120 (5%)
Frame = +2
Query: 593 PXPXKGRVXXVXPXGPPPPXHPSXXPXPPXXXVXX-------PPPRXFXXSPGXFPPXKX 751
P P +GR P PPP PS PP PPP S PP
Sbjct: 352 PLPPQGRSA---PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 752 XXXXXXXXXXXXXXXXXPXSPXSPPFPPXPXKXXAPFSP*XPPXXXXPXPXPGXXGPXPP 931
P PP P AP +P PP P P PP
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 30.3 bits (65), Expect = 0.42
Identities = 23/79 (29%), Positives = 27/79 (34%)
Frame = +1
Query: 631 KXPPPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFPXPLPXXPXI 810
K PPPP PP + G + L P PP PLP P P
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP--PPRSNAAGSIPLPPQGRSAPPPP-- 364
Query: 811 XXXPXFSPPSGEXXCPLFS 867
P +P +G PL S
Sbjct: 365 --PPRSAPSTGRQPPPLSS 381
Score = 29.5 bits (63), Expect = 0.74
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +1
Query: 637 PPPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPL-PXFPXPLPXXPXIX 813
PP P PP S PP +P P P AP+ P P +P P +
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP----SLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 814 XXPXFSPPS 840
PP+
Sbjct: 471 PAAPAPPPA 479
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/86 (25%), Positives = 25/86 (29%), Gaps = 12/86 (13%)
Frame = +3
Query: 639 PPPXXTXXKXPXLXXXXXPXPPPGTXKXPXXFSPLXXP------PPPXPPPX------FP 782
PPP P PPP + P+ PPP PPP P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 783 XPPXRXTRXXPXPXLFPPXRXXXXPP 860
PP + P P P PP
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 598 PXKRPXXXRFXKXPPPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPL 771
P P PP PP P G PP P PP P AP+
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP-PPAPAPAPAAPV 488
Score = 27.1 bits (57), Expect = 4.0
Identities = 30/115 (26%), Positives = 32/115 (27%), Gaps = 13/115 (11%)
Frame = +2
Query: 629 PXGPPPPXHPSXX--PXPPXXXV-XXPPPRXFXXSPGXFPPXKXXXXXXXXXXXXXXXXX 799
P PPPP + P PP PPP S G PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 800 XPXSPXSPPF--------PPXPXKXXAPFS--P*XPPXXXXPXPXPGXXGPXPPP 934
+P PP PP P P S P PP P P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +2
Query: 821 PPFPPXPXKXXAPFSP*XPPXXXXPXPXPGXXGP----XPPPXXLGXXXSXP 964
PP PP P A P P P P P P PPP S P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP 388
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 693 PXPPPGTXKXPXXFSPLXXPPPPXPPP 773
P PPP + + PPP PPP
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 25.8 bits (54), Expect = 9.1
Identities = 22/97 (22%), Positives = 24/97 (24%)
Frame = +1
Query: 640 PPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFPXPLPXXPXIXXX 819
PP P S PPP P PP P P P +
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIP---PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 820 PXFSPPSGEXXCPLFSLXPXAXXGPSPXSRXXXXXXP 930
P PPS + P P SR P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 642 PPXXTXXKXPXLXXXXXPXPPPGTXKXPXXFSPLXXPPPPXPPPXFP 782
PP P P PPP + P P+ PP PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 643 PPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFP 783
PP P P S PPP P PP P AP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.42
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 750 PPPPXPPPXFPXPPXRXTRXXPXPXLFPPXRXXXXPPFLPXP 875
P PP PP P PP P PP P +P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +2
Query: 512 PKXVXPVXPKLXGXPXXXXVTKXPXKX---PXPXKGRVXXVXPXGPPPPXHPSXXPXPP 679
P PV P+ P T P P P + P PPPP S P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 699 PPPGTXKXPXXFSPLXXPPPPXPPPXFPXPP 791
PP + P P+ PPPP PP PP
Sbjct: 1699 PPQMSAPTPPP-PPMSVPPPPSAPPMPAGPP 1728
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 636 APPPXXTXXKXPXLXXXXXPXPPPGTXKXPXXFSPLXXPPPPXPPP 773
AP P P + P PPPG + PPPP PPP
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGV-------AGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.24
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = +3
Query: 639 PPPXXTXXKXPXLXXXXXPXPPPGTXKXPXXFSPLXXPPPP----XPPPXFPXPPXRXTR 806
P T + L P PPP +P+ PPP PPP P PP
Sbjct: 715 PDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAG 772
Query: 807 XXPXPXLFPP 836
P P PP
Sbjct: 773 AGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.42
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +1
Query: 631 KXPPPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFPXP 789
K PPPP P P+ + PP + P PP P P P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.74
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 717 KXPXXFSPLXXPPPPXPPPXFPXPPXRXTRXXPXPXLFPPXRXXXXPPFLPXP 875
K P P P P P P P PP P P PP PP P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.74
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +1
Query: 700 PPPXLXXIPXXFPPXXXPPXXAPLPXFPXPLPXXPXIXXXPXFSPP 837
PPP +P P P AP+ P P P P + PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 554 PXXXXVTKXPXKXPXPXKGRVXXVXPXGPPPPXHPSXXPXPPXXXVXXPPP 706
P T P P P + P PPPP P PP PPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Frame = +3
Query: 636 APPPXXTXXKXPXLXXXXXPXPPPGTXKXPXXFSPLXXPPPPX------PPPXFPXP 788
+PPP P P PPP P P PPPP PPP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPA----PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 637 PPPPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXA 765
P P P P+ G PPP + PP PP A
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 26.2 bits (55), Expect = 6.9
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +2
Query: 809 SPXSPP---FPPXPXKXXAPFSP*XP----PXXXXPXPXPGXXGPXPPP 934
SP PP P P P P P P P P GP PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 643 PPXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFPXPLP 795
PP PP P+ + PP + PP P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +2
Query: 830 PPXPXKXXAPFSP*XPPXXXXPXPXPGXXGPXPPPXXLGXXXSXP 964
PP P P P P P G P PPP + P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 89 KXKXKKKKXXKKXKKKKXXKXXPGP 163
K K KKKK KK KK K PGP
Sbjct: 436 KKKKKKKKNNKKKKKNKRKNIKPGP 460
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.74
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 723 PXXFSPLXXPPPPXPPPXFPXPPXRXTRXXPXP 821
P PL PPPP PPP P P T P P
Sbjct: 229 PKQADPLPAPPPP-PPPTLP-PQSTNTSQLPMP 259
Score = 26.2 bits (55), Expect = 6.9
Identities = 19/70 (27%), Positives = 24/70 (34%)
Frame = +2
Query: 470 LPPXFRLRQPVSPXPKXVXPVXPKLXGXPXXXXVTKXPXKXPXPXKGRVXXVXPXGPPPP 649
+PP + +Q P P P P L P + +V PPPP
Sbjct: 223 IPPTYTPKQ-ADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNI-----PPPP 276
Query: 650 XHPSXXPXPP 679
PS P PP
Sbjct: 277 ATPSQPPRPP 286
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.74
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 693 PXPPPGTXKXPXXFSPLXXPPPPXPP 770
P PPP P F P PPPP PP
Sbjct: 9 PPPPP----PPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 738 PLXXPPPPXPPPXFPXP 788
P PPPP PPP F P
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 629 PXGPPPPXHPSXXPXPPXXXVXXPPP 706
P G PPP P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 80 AKKKXKXKKKKXXKKXKKKK 139
AKK+ K KK+K KK KKKK
Sbjct: 453 AKKEKKEKKEKKEKKEKKKK 472
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +3
Query: 738 PLXXPPPPXPPPXFPXPPXRXTRXXPXPXLFPPXRXXXXPPFLPXPXRXXXXLXXXPG 911
P PP P P P P P + PP PP +P P + PG
Sbjct: 495 PTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPP--GMALPPGMPAPFPGYPAVPAMPG 550
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/59 (27%), Positives = 19/59 (32%)
Frame = +1
Query: 646 PXPPXXKXXPSXSXGXXTPPPXLXXIPXXFPPXXXPPXXAPLPXFPXPLPXXPXIXXXP 822
P PP P P + + PP PP A P P P P P + P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMV-PPGMALPPGMPAPFPGYPAVPAMP 549
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = -1
Query: 875 GXREKRGXXXSPXGGEKXGXXXXXGXXGRGXGKXGRGAXXGG-XXXGGKXXGXFXSXGG 702
G R RG GG G G GRG + GRG G GG G + GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGG-GRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -1
Query: 794 GRGXGKXGRGAXXGGXXXGGKXXGXFXSXGGGVXXPXXXEGWXFXXGGXGGG 639
GRG + GRG GG GG G + GGG G G GG
Sbjct: 10 GRGGSRGGRGGFNGG--RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.8 bits (49), Expect(2) = 3.9
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +3
Query: 750 PPPPXPPPXFPXPPXRXTRXXPXPXLF 830
PPPP PPP + P LF
Sbjct: 370 PPPPPPPPELLNHSPKSRPLGDKPYLF 396
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 732 FSPLXXPPPPXPPP 773
+S + PPP PPP
Sbjct: 363 WSNISYSPPPPPPP 376
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -3
Query: 933 GGGXGPXXPGXGXGXXXXGGX*GEKGAXXFXGX--GGKGGXXGDXG 802
GGG G PG G G GG GE G GG GG G G
Sbjct: 194 GGGSGGPPPGPG-GFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 803 GXXGRGXGKXGRGAXXGGXXXGGKXXGXF--XSXGGGVXXPXXXEGWXFXXGGXGG 642
G GRG + GRG GG GG G F S GG F G GG
Sbjct: 136 GRGGRGGFRGGRGGSRGG--FGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 9.1
Identities = 20/82 (24%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +1
Query: 580 AXXXPXPXKRPXXXRFXKXPPPPXPPXXKXXPSXSXGXXTP-PPXLXXIPXXFPPXXXPP 756
A P P P P PP P PS P P + +P P P
Sbjct: 571 ALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQR-PAVPVVP 629
Query: 757 XXAPLPXFPXPLPXXPXIXXXP 822
+P P P P + P
Sbjct: 630 EAPSVPQ-PPAAPVVPEVPSVP 650
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +3
Query: 699 PPPGTXKXPXXFSPLXXPPPPXPPPXFPXPPXRXTRXXP 815
PPP T + PPPP + P TR P
Sbjct: 909 PPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPP 947
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,904,326
Number of Sequences: 5004
Number of extensions: 29666
Number of successful extensions: 394
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 495302128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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