Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E15
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0062 - 476027-476044,476791-477195,477287-477574,477653-47...    31   1.6  
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101...    29   6.4  
02_02_0138 + 7114949-7115656,7116388-7116435,7116830-7117988,711...    28   8.5  

>11_01_0062 -
           476027-476044,476791-477195,477287-477574,477653-477830,
           478005-478133,478531-478729,478832-478970,479130-479195,
           480459-480580,480672-480742,480819-480903,481335-481453,
           481577-481687,481945-482117,482375-482446,482768-482862,
           483361-483450,483550-483646
          Length = 818

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 222 VISNAEKSDGKIYTIHA--DINDNRIEKGVYEVDLNLNTTVKILDKGRDLCYDDD 380
           +IS A+  D  +Y I+   +++D+   +G       L      +D G D+CYDDD
Sbjct: 245 IISLAQSEDSDVYDIYTVKEVDDDTTMEGTSSAPYPLLQ----VDNGDDVCYDDD 295


>03_02_1012 +
           13207907-13207990,13209196-13209280,13209402-13210186,
           13210262-13210462,13210580-13210690,13211105-13211487,
           13211594-13211702,13211786-13211866,13212088-13212156,
           13212379-13212467,13212619-13212780,13212859-13212916,
           13213143-13213373,13213516-13213662,13213779-13214333,
           13214562-13214819,13215096-13215203,13215760-13215854,
           13215946-13216102,13216466-13216666,13217542-13217670,
           13218292-13218567
          Length = 1457

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = +3

Query: 429 GDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKAVKQV 602
           G KS   YG F   V SL      D  Y    DN +YK+ E  +K  L  NL     +
Sbjct: 169 GTKSTNAYGGFNKVVASL------DSSYLDMGDNVSYKIPEGYDKLALSLNLPVFSDI 220


>02_02_0138 +
           7114949-7115656,7116388-7116435,7116830-7117988,
           7118336-7118424,7118697-7118732
          Length = 679

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 531 KAYKVTENGNKYVLDDNLKAVKQVMFDNFN-VLHYVTLDNEVFKVKETLEK 680
           K YK+       +LD   KA  ++MFDN   V H   L ++ F+V E +++
Sbjct: 215 KGYKLDIFAYNMLLDALAKAGMKIMFDNREWVFHMYMLVDQAFQVFEDMKQ 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,578,676
Number of Sequences: 37544
Number of extensions: 332883
Number of successful extensions: 800
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)