Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E15
         (869 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me...    30   4.8  
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro...    30   4.8  
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ...    30   4.8  

>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
            D.melanogaster alpha-spectrin mRNA, complete cds. ).
          Length = 2415

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = +3

Query: 411  IYVYKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKA 590
            + +Y   +KS ++    K DV++L   N  D +    ND + +       K  +D  L A
Sbjct: 976  VALYDYTEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKK--IDAGLSA 1033

Query: 591  VKQVMFDNFNV 623
             +Q + DN ++
Sbjct: 1034 SQQNLVDNHSI 1044


>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = +3

Query: 411  IYVYKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKA 590
            + +Y   +KS ++    K DV++L   N  D +    ND + +       K  +D  L A
Sbjct: 976  VALYDYTEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKK--IDAGLSA 1033

Query: 591  VKQVMFDNFNV 623
             +Q + DN ++
Sbjct: 1034 SQQNLVDNHSI 1044


>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
            protein.
          Length = 2415

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = +3

Query: 411  IYVYKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKA 590
            + +Y   +KS ++    K DV++L   N  D +    ND + +       K  +D  L A
Sbjct: 976  VALYDYTEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKK--IDAGLSA 1033

Query: 591  VKQVMFDNFNV 623
             +Q + DN ++
Sbjct: 1034 SQQNLVDNHSI 1044


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,885,362
Number of Sequences: 53049
Number of extensions: 584807
Number of successful extensions: 1663
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)