Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_E13
(850 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 222 8e-57
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 222 8e-57
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 190 4e-47
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 165 1e-39
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 147 3e-34
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 143 4e-33
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 136 5e-31
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 132 1e-29
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 113 7e-24
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 85 2e-15
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 77 4e-13
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 75 2e-12
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 74 4e-12
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 74 5e-12
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 71 5e-11
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 59 2e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 57 6e-07
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 48 4e-04
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 44 0.004
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.42
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 35 2.2
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 33 9.1
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 222 bits (543), Expect = 8e-57
Identities = 104/150 (69%), Positives = 118/150 (78%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R W +R GG +P +R GRPAANT +GP R H+VR RGGN K RALR
Sbjct: 1 MGISRDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 428
LD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY L
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 429 PLGRKKGAKLTEAEEAIINKKRSQKTARKY 518
PLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 120 PLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 222 bits (543), Expect = 8e-57
Identities = 104/150 (69%), Positives = 118/150 (78%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R W +R GG +P +R GRPAANT +GP R H+VR RGGN K RALR
Sbjct: 1 MGISRDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 428
LD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY L
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 429 PLGRKKGAKLTEAEEAIINKKRSQKTARKY 518
PLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 120 PLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2
Query: 488 EEKSKDSKKILGKGNVLXKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFY 667
+++SK +K + K+ L EQF G+LLAC+ASRPGQCGRADGY+L G ELEFY
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 198
Query: 668 LRKIKSKRAK 697
LRKIK+++ K
Sbjct: 199 LRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 190 bits (463), Expect = 4e-47
Identities = 94/155 (60%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R +R A GG + +R GRPAANT LG R H VR+RGGN K RALR
Sbjct: 1 MGISRDSAHKRRATGGKR-KSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 428
L+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY L
Sbjct: 60 LETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119
Query: 429 PLGRKKGAKLTEAEEA--IINKKRSQKTARKYLAR 527
PLGRK+ K + E+ ++ KKRS+K +KYL R
Sbjct: 120 PLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLER 154
Score = 85.8 bits (203), Expect = 1e-15
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 485 QEEKSKDSKKILGKGNVLXKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEF 664
++ K KK L + KVE AL +QF +GR+LAC++SRPGQCGR+DGYIL G ELEF
Sbjct: 141 KKRSEKVMKKYLERQKY-GKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEF 199
Query: 665 YLRKIKSKR 691
YL+KIKSK+
Sbjct: 200 YLKKIKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 165 bits (401), Expect = 1e-39
Identities = 88/150 (58%), Positives = 102/150 (68%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R W +R GG +P +R GRPAANT +GP R H+VR RGG
Sbjct: 1 MGISRDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------- 51
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 428
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY L
Sbjct: 52 -----------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 99
Query: 429 PLGRKKGAKLTEAEEAIINKKRSQKTARKY 518
PLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 100 PLGRKKGAKLTPEEEEILNKKRSKKIQKKY 129
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2
Query: 488 EEKSKDSKKILGKGNVLXKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFY 667
+++SK +K + K+ L EQF G+LLAC+ASRPGQCGRADGY+L G ELEFY
Sbjct: 119 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 178
Query: 668 LRKIKSKRAK 697
LRKIK+++ K
Sbjct: 179 LRKIKARKGK 188
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 147 bits (357), Expect = 3e-34
Identities = 83/158 (52%), Positives = 99/158 (62%), Gaps = 9/158 (5%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRX-HSVRSRGGNXKXRAL 245
+G+ R +R A GG + +R GR ANT L + VR RGGN K RAL
Sbjct: 1 MGISRDSMHKRRATGGKQ-KAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRAL 59
Query: 246 RLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYT 425
RLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY
Sbjct: 60 RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYG 119
Query: 426 LPLGRKK--------GAKLTEAEEAIINKKRSQKTARK 515
+ +GRKK A+ E E A K+S RK
Sbjct: 120 VDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRK 157
Score = 79.8 bits (188), Expect = 8e-14
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +2
Query: 482 QQEEKSKDSKKILGKGNVLXKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELE 661
++ +KS + L K ++ + EQF +GRLLAC++SRPGQCGRADGYIL G ELE
Sbjct: 146 EETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELE 205
Query: 662 FYLRKIKSKRAK 697
FY++K++ K+ K
Sbjct: 206 FYMKKLQRKKGK 217
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 143 bits (347), Expect = 4e-33
Identities = 71/124 (57%), Positives = 87/124 (70%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R +R GG +R GRP++NT LG VR RGGN K RALR
Sbjct: 1 MGISRDSRHKRRLTGGRY-PVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 428
LD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L
Sbjct: 60 LDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGL 119
Query: 429 PLGR 440
LG+
Sbjct: 120 ELGK 123
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +2
Query: 491 EKSKDSKKILGKGNVLXKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYL 670
E K S+ V V L +QF +GRLLAC++SRPGQCGR DGY+L G EL FY
Sbjct: 120 ELGKSSEDPQASEKVAALVPRTLLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYR 179
Query: 671 RKIKSKR 691
R++ K+
Sbjct: 180 RRMDKKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 136 bits (330), Expect = 5e-31
Identities = 72/147 (48%), Positives = 95/147 (64%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R+ +R GG + + + GR ANT LG R VR+RGGN K RALR
Sbjct: 1 MGIVRSRLHKRKITGGKT-KIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 428
LDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV VDA PF++WY HY +
Sbjct: 60 LDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGI 119
Query: 429 PLGRKKGAKLTEAEEAIINKKRSQKTA 509
L K K T+A A+ +K+ +K+A
Sbjct: 120 DLDADK--KSTKA--AVAAEKKGRKSA 142
Score = 62.1 bits (144), Expect = 2e-08
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +2
Query: 542 KVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIKSKR 691
+VE A+ +Q GR+LA + SRPGQ GRADG +L G EL+FYL++++ K+
Sbjct: 170 RVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 132 bits (319), Expect = 1e-29
Identities = 65/116 (56%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Frame = +3
Query: 129 PSAXQRXSAXGRPAANTXLGPXRX-HSVRSRGGNXKXRALRLDTGNFSWGSECSTRKTRI 305
P ++ GR ANT L + VR RGGN K RALR DT N+SWGSE TRKTRI
Sbjct: 117 PLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRI 176
Query: 306 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 473
+DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 177 LDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 113 bits (271), Expect = 7e-24
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R +R A GG ++ + GR ANT LG R H VR R G K RALR
Sbjct: 1 MGITRDSRHKRRATGGKK-NSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 422
L+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D PFR W+ Y
Sbjct: 60 LENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFY 117
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +2
Query: 509 KKILGKGNVLX--KVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIK 682
KK K VL K + AL E F +GR+LAC++SRPGQ G +GYIL G EL+FY +KI
Sbjct: 174 KKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELDFYSKKIS 233
Query: 683 SKR 691
K+
Sbjct: 234 DKK 236
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = +3
Query: 204 SVRSRGGNXKXRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVV 383
++R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +
Sbjct: 54 TIRCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQI 113
Query: 384 DATPFR 401
D+ PF+
Sbjct: 114 DSAPFK 119
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 557 LXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIKSK 688
+ +Q +LA ++SRPGQ G ADGYIL G EL FY +K+ K
Sbjct: 131 ILDQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = +3
Query: 132 SAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALRLDTGNFSWGSECSTRKTRIID 311
S +R + G ++T +G + VR RGGN K +ALRLD G+F + + R +++
Sbjct: 21 SRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQ 80
Query: 312 VVYNASNNELVRTKTLVKNAIVVVDATPFR 401
VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 81 VVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 530 NVLXKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIKSK 688
+V V+ +L E F G L A + SRPGQ G A G++L G EL+FY K K
Sbjct: 115 DVARDVDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 75.4 bits (177), Expect = 2e-12
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +2
Query: 545 VEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIKSKRAK 697
VE +L E+F TGRLLAC++S+PGQ GRADGY+ G ELEF+ +K+K+K+AK
Sbjct: 70 VEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 42.7 bits (96), Expect = 0.011
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +3
Query: 363 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 521
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 522 AR 527
R
Sbjct: 61 TR 62
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALR 248
+G+ R +R A G +R GR ANT +GP R H VR+RGGN K R LR
Sbjct: 1 MGISRDSRHKRSATGAKRSH-YRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLR 59
Query: 249 LDTGNFSWGSECSTRKTRIIDV 314
L++GNFSWGSE RK R+I V
Sbjct: 60 LESGNFSWGSEGIARKVRVIVV 81
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2
Query: 542 KVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIK 682
KVE AL +QF GRL A V+SRPGQ GR DGYIL G EL FY R I+
Sbjct: 94 KVEPALEKQFEAGRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 73.7 bits (173), Expect = 5e-12
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +3
Query: 69 LGLRRAXWXQRXAXGGSXLRPS-AXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRAL 245
+G+ R +R + GG L+ +R A GR +NT +G +R RGG K RAL
Sbjct: 1 MGINREGLHKRKSTGG--LKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRAL 58
Query: 246 RLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVD 386
L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 59 FLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLD 105
Score = 58.8 bits (136), Expect = 2e-07
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +2
Query: 557 LXEQFHTGRLLACVASRPGQCGRADGYILXGXELEFYLRKIKSK 688
L +Q +G++LA + SRPGQ GRADGYIL G EL+++L+KI+ K
Sbjct: 135 LIDQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +2
Query: 590 ACVASRPGQCGRADGYILXGXELEFYLRKIKSKRAK 697
AC+ASRPGQCGRADGYIL G ELEFYLRKIK+K+ K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.8 bits (136), Expect = 2e-07
Identities = 29/96 (30%), Positives = 48/96 (50%)
Frame = +3
Query: 111 GGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALRLDTGNFSWGSECST 290
GG + S + S P R RGGN K +A+ L G+F W + +
Sbjct: 8 GGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLS 67
Query: 291 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPF 398
+ ++I+ V+YN +N +LV+ + L K I+ +D+ PF
Sbjct: 68 KNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 56.8 bits (131), Expect = 6e-07
Identities = 33/88 (37%), Positives = 46/88 (52%)
Frame = +3
Query: 114 GSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALRLDTGNFSWGSECSTR 293
G S ++ + GR A T +G R VR+ GGN K RALRL+ S + T+
Sbjct: 13 GGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGETK 72
Query: 294 KTRIIDVVYNASNNELVRTKTLVKNAIV 377
KT+I V N+++ VR K L K AI+
Sbjct: 73 KTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +3
Query: 114 GSXLRPSAXQRXSAXGRPAANTXLGPXRXHSVRSRGGNXKXRALRLDTGNFSWGSECSTR 293
G LRP+ +R GR T LG +RS GGN K LR D N + +TR
Sbjct: 14 GGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTR 73
Query: 294 KTRIIDVVYNASNNELVRTKTLVKNAIV 377
K +I V N+++ V+ + + ++
Sbjct: 74 KVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 44.4 bits (100), Expect = 0.004
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 99 RXAXGGSXLRPSAXQRXSAXGRPAANTXLGPXRXHSV-RSRGGNXKXRALRLDTGNFSWG 275
+ A GGS L+ S +R GR T LG V R+ GGN K +T N
Sbjct: 10 KKATGGS-LKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDA 68
Query: 276 SECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVD 386
SE +K +II V N +N+ V+ + K ++ +
Sbjct: 69 SEKKIKKAKIITVKANPANSHYVQRNIINKGTVIATE 105
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.42
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 276 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 440
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 441 KKGAKLTEAEEAIINKKRS 497
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +3
Query: 336 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 461
ELVRT+TLVKNAI+ Q Y HY L +G KK A T
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTT 64
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 33.1 bits (72), Expect = 9.1
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 114 GSXLRPSAXQRXSAXGRPAANTXLGPXR-XHSVRSRGGNXKXRALRLDT-GNFSWGSECS 287
G +RP +R G P T +G R R GGN K + L+ T N +
Sbjct: 14 GGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPETGE 72
Query: 288 TRKTRIIDVVYNASNNELVRTKTLVKNAIV 377
+ RI +VV N ++ R + K AI+
Sbjct: 73 VKCVRIEEVVKNPASQYYERHGVITKGAII 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,694,958
Number of Sequences: 1657284
Number of extensions: 9446249
Number of successful extensions: 23048
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23035
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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