Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E10
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.9  
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458...    28   8.5  
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786...    28   8.5  
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           28   8.5  
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275...    28   8.5  
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564...    28   8.5  

>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 414 CDAELLPEAGNAGPGQTQPV 355
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>10_08_0429 + 17845303-17845431,17845508-17845684,17845782-17845895,
            17846386-17846520,17847659-17847790,17847919-17848071,
            17848574-17848709,17849338-17849443,17849538-17849730,
            17849803-17849963,17850227-17850442,17850732-17850997,
            17851505-17851779,17851871-17852327,17853973-17854055,
            17854260-17854469,17854897-17855373,17855462-17855743,
            17855910-17856236,17856418-17856507,17856788-17856899,
            17857004-17857104,17857524-17857568
          Length = 1458

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 489  LGEFLIANALALRSWLLLWNKLTLPCDAELLPE 391
            +G + +   +A   W++ W  + + CD +LL E
Sbjct: 1055 VGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQE 1087


>09_02_0362 +
           7860088-7860197,7861606-7861636,7861738-7861801,
           7861922-7862052,7863575-7863784,7863891-7863956,
           7864868-7865075,7866270-7866325,7866406-7867128,
           7868246-7868299,7868667-7868695,7869501-7869585,
           7870032-7870202,7870246-7870827
          Length = 839

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +1

Query: 376 TRIPGFGEQLGVAGQGQLVPQ*QPRPERQGVRDQELSQRHPQRAQLQHAGRRSGLHVQTE 555
           T+ P   +Q     Q QL  Q Q   + Q     +L Q+H  + QLQ    +  + +QT+
Sbjct: 649 TQQPPMQQQQLQQQQNQLQQQNQLHQQHQLQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQ 708

Query: 556 G 558
           G
Sbjct: 709 G 709


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 215 SVRVHCEAAGLSPRTCRHVST 153
           S+R+HC A  L+PR CR   T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421


>07_01_0370 +
           2749353-2749786,2749949-2750346,2750435-2750519,
           2751200-2751314,2751538-2751591
          Length = 361

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 272 AEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 162
           A  V++ AG R   GG GG V VH  AA  SP  T RH
Sbjct: 17  AASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52


>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
            21556524-21556620,21557113-21557141,21557620-21557781,
            21557981-21558061,21558156-21558314,21558394-21558510,
            21558598-21558666,21558753-21558831,21560884-21561050,
            21561109-21561229,21561522-21561649,21562293-21562361,
            21562408-21562539,21562619-21562991,21563274-21563398,
            21563500-21563655,21563785-21564198,21564634-21564691,
            21566522-21566648,21568047-21568305,21569005-21569104,
            21569231-21569317,21569454-21569692,21569914-21569999,
            21570409-21570532,21571111-21574332
          Length = 2444

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 394  RSRECGSRSDSARARLRCLERAPAEAALSLWRSLKS 287
            R R+ G    SA  R++ LER  A +    WRSL++
Sbjct: 1406 RRRQLGRSLRSAACRIQGLERLQAPSIEKAWRSLRN 1441


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,997,406
Number of Sequences: 37544
Number of extensions: 384075
Number of successful extensions: 1161
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)