Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E07
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0430 - 28923784-28923830,28923931-28924341,28924552-289249...    29   4.8  

>02_05_0430 -
           28923784-28923830,28923931-28924341,28924552-28924963,
           28925000-28925542,28925790-28925884,28926003-28927033,
           28927304-28927452,28927483-28927523,28927594-28928206
          Length = 1113

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 483 TXTKNLVDAKEEEKRRLTKEWKNQFEGQSRYRESG 587
           T T+ LV  K++EK R  +EW+ + + QS   + G
Sbjct: 44  TQTELLVKEKKDEKNRKLREWRAKRKAQSNSVDGG 78


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,798,732
Number of Sequences: 37544
Number of extensions: 203526
Number of successful extensions: 468
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)