Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E07
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    29   0.18 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    29   0.18 

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 448 EIRVREPAEQLLRXRRIWLTPKKKKNGD*PRNGRISLKXSRVIEKVVL 591
           E+R + P    L    IWL PK+   G  P +G + L  SR  E + L
Sbjct: 179 EVRAKLPTGDWL-WPAIWLLPKRNAYGTWPASGEMDLMESRGNENLYL 225


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 448 EIRVREPAEQLLRXRRIWLTPKKKKNGD*PRNGRISLKXSRVIEKVVL 591
           E+R + P    L    IWL PK+   G  P +G + L  SR  E + L
Sbjct: 179 EVRAKLPTGDWL-WPAIWLLPKRNAYGTWPASGEMDLMESRGNENLYL 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,388
Number of Sequences: 2352
Number of extensions: 6425
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)