Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_E04
(864 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 100 5e-20
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 90 6e-17
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 87 4e-16
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 86 9e-16
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 79 1e-13
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 78 3e-13
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 71 3e-11
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 70 7e-11
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 69 2e-10
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 64 6e-09
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 63 1e-08
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 60 7e-08
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 54 4e-06
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 54 5e-06
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 54 5e-06
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 52 1e-05
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 51 4e-05
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 48 3e-04
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 47 7e-04
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 47 7e-04
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 44 0.007
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 38 0.33
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 38 0.33
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 36 1.0
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 36 1.3
UniRef50_Q00Y50 Cluster: Chromosome 12 contig 1, DNA sequence; n... 36 1.7
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 36 1.7
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 34 5.3
UniRef50_Q9U286 Cluster: DNA topoisomerase; n=2; Bilateria|Rep: ... 33 7.1
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 100 bits (239), Expect = 5e-20
Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR-LGCTWAKTRVNTPRKLPQ 525
AK R +G K + T K+ +
Sbjct: 123 AKSRQVGKEKGKYKEETIEKMQE 145
Score = 95.9 bits (228), Expect = 1e-18
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 90.2 bits (214), Expect = 6e-17
Identities = 39/59 (66%), Positives = 51/59 (86%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
GKV+ VYR+++V+++ERI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR
Sbjct: 77 GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR 135
Score = 36.3 bits (80), Expect = 1.0
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 162 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
H+RR L +P ++++ + P+RKDDEVQVVRG YK
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYK 73
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 273 HYK 281
HY+
Sbjct: 61 HYE 63
Score = 81.0 bits (191), Expect = 4e-14
Identities = 36/57 (63%), Positives = 49/57 (85%)
Frame = +1
Query: 289 QVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
Q+GKV+ VYRKK+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+R+
Sbjct: 66 QIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK 121
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 86.2 bits (204), Expect = 9e-16
Identities = 38/62 (61%), Positives = 51/62 (82%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+G V+ VYRKK+V+YIE +Q+EKANG T +VGIHPSK VI +LK++KDRK I +++
Sbjct: 45 KGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQK 104
Query: 460 AK 465
AK
Sbjct: 105 AK 106
Score = 37.5 bits (83), Expect = 0.43
Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +3
Query: 204 LRQKFNVKSMPIRKDDEVQV--VRGHYK 281
L NV+SMP RKD+EVQV VRGHYK
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYK 45
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MK N +VT F+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 273 HYK 281
YK
Sbjct: 61 SYK 63
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 77.8 bits (183), Expect = 3e-13
Identities = 31/56 (55%), Positives = 46/56 (82%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 462
GKV+ + RK+F +Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 96 GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +3
Query: 57 VLSRVVLAKSDRMKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMP 236
+L++++ + +MKFNKQ++ F+AP+ +RR +MSS LSKELR K+ +++P
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALP 77
Query: 237 IRKDDEVQVVRGH 275
+RKDDEV + RGH
Sbjct: 78 VRKDDEVLICRGH 90
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +1
Query: 262 LYVDTTKCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 441
L V +K Q GK+ VYR KF V ++++ +EK NGA+ + +HPSK VI KL ++KDRK
Sbjct: 57 LVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRK 116
Query: 442 AILDRRAKGRL 474
A++ R+ G+L
Sbjct: 117 ALIQRKG-GKL 126
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTG 293
F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG K G
Sbjct: 20 FTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEG 68
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 70.1 bits (164), Expect = 7e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
GKV VYR K+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR
Sbjct: 68 GKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGR 126
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
F+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 20 FNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN +V+ ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 273 HYKV 284
H KV
Sbjct: 61 HQKV 64
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
GKV V R K+V+ I+++ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 66 GKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MK + +V+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 273 HYKVPTG 293
+K G
Sbjct: 61 THKGTKG 67
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 474
GKV VYRK++ + IE++ R KANG + I S+C+I K +N+DRK +L R+A ++
Sbjct: 67 GKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKV 126
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
GKV+ V + + ++ REK NG T +V +HPS C+I KLKM+K RK +++RR GR
Sbjct: 68 GKVIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGR 126
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 278
F+A + +S+ L+KE + VK +PIR+DDEV + G +
Sbjct: 20 FNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSGKF 63
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +3
Query: 174 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +K
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFK 81
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 54.4 bits (125), Expect = 4e-06
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Frame = +3
Query: 63 SRVVLAKSDR---MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSM 233
+RV LA S R MK++ VT F+APS RR LMS+ LS EL+ + ++
Sbjct: 7 TRVRLAVSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAV 66
Query: 234 PIRKDDEVQVVRGHYK 281
PIR +DEV+V RG +K
Sbjct: 67 PIRVNDEVRVTRGSFK 82
Score = 36.7 bits (81), Expect = 0.76
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANG 369
GKV+ VYRKK+V++I I R+K NG
Sbjct: 86 GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 54.0 bits (124), Expect = 5e-06
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +K
Sbjct: 17 FNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFK 61
Score = 39.1 bits (87), Expect = 0.14
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 456
G+V+ V K+ +Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 65 GEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 54.0 bits (124), Expect = 5e-06
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG +K
Sbjct: 17 FNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFK 61
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 441
G+V+ V K++ +Y+E ++ +G IHPS +I+KL +KD K
Sbjct: 65 GEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 150 SAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTG 293
+AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++ G
Sbjct: 31 NAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKEG 78
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MK N VT F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 273 HYK 281
+K
Sbjct: 61 GHK 63
Score = 37.9 bits (84), Expect = 0.33
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVG--IHPSKCVIVKLKMNKDRKAILDRR 459
GKV+ V R+ + + +E I ++ N V IHPS C+I +L MN R + RR
Sbjct: 66 GKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRAIKRR 122
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
+ AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 18 YDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Score = 37.5 bits (83), Expect = 0.43
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 465
GKV V KK +++E KA+G IHPSK V+ +L ++ R+ L R K
Sbjct: 66 GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 153 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTG 293
AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +K G
Sbjct: 20 APWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTRG 66
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGR 471
GKV V K+ +Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAR 125
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 46.8 bits (106), Expect = 7e-04
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGR 471
GKV+ V RK+ V IE + ++KA+G YV +H SK +I KL +K+R ++R+ K R
Sbjct: 62 GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKMR 121
Score = 41.1 bits (92), Expect = 0.035
Identities = 15/42 (35%), Positives = 32/42 (76%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG
Sbjct: 14 YNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRG 55
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 281
+ A + R + + SPLSKELR K+ +S+ + + D V VVRG YK
Sbjct: 12 YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYK 56
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 37.9 bits (84), Expect = 0.33
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
G + + + + VYIE K +G A V I+PSK I K + RK L+R+ + R
Sbjct: 68 GVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 37.9 bits (84), Expect = 0.33
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 147 FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTG 293
++AP HIR+ M + LS+ L +++ +S + D V+++RG +K G
Sbjct: 20 YTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTEG 68
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.3 bits (80), Expect = 1.0
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 153 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTGWQSDA 308
AP H+RR M S L + +++S+ IR D V+V+RG + P +++A
Sbjct: 16 APVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDFGFPNSVKAEA 67
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 35.9 bits (79), Expect = 1.3
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 153 APSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTGWQSDAGVS*KVCC 332
AP H R + + LS +LR+++ +++ + D V+V+RG + G + + V
Sbjct: 15 APLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAV-- 72
Query: 333 IH*ED---SKRKGQWCXSICRHSPFKVCDCQVEDE*R 434
IH ED K G+ S +V D +EDE R
Sbjct: 73 IHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR 109
>UniRef50_Q00Y50 Cluster: Chromosome 12 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 12 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = -2
Query: 500 TLVLAQVQPSLPFALRSRIALRSLFIFNLTITHFEG*MPTYAVAPLA 360
++ ++ ++P P LR++ ALRSL +++L + H +G PT+ P++
Sbjct: 3 SIAISSIRPEAP-PLRAKRALRSLSMWSLVMMHLDGSTPTWICVPVS 48
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +3
Query: 186 SPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
+PLS EL +++ +K + IRKDD V+V+RG
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRG 36
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 33.9 bits (74), Expect = 5.3
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +3
Query: 180 MSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKVPTGWQSDAGVS*KVCCIH-*EDSKR 356
+ S LSK+L++K+ +S+ + + D V ++RG +K G ++ + I + K
Sbjct: 23 LGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVDGKVAEVSTAKSSVAIEGVKKEKT 82
Query: 357 KGQWCXSICRHSPFKVCDCQVEDE*R----PQSNPRSQSK 464
KG S V ED+ R +PR Q K
Sbjct: 83 KGDKFDVFIHTSNLLVTSLNTEDKWRIAKLEGKDPRKQPK 122
>UniRef50_Q9U286 Cluster: DNA topoisomerase; n=2; Bilateria|Rep: DNA
topoisomerase - Caenorhabditis elegans
Length = 855
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -1
Query: 507 CIYPCLGPSAAQSALCSAIEDCFAVFIHLQLDNHTL*RVNADICCXTIGLF 355
C++P S + + +C ++DC V + L +H R+ + C +GLF
Sbjct: 702 CVHPSCQYSISSNGVCGCLQDCGGVML-LDTQSHPKWRMTCNKCPSVVGLF 751
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,536,792
Number of Sequences: 1657284
Number of extensions: 10072600
Number of successful extensions: 22866
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22863
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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