Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E04
         (864 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31444| Best HMM Match : No HMM Matches (HMM E-Value=.)              95   5e-20
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_46751| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.5  
SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.5  

>SB_31444| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 45/65 (69%), Positives = 55/65 (84%)
 Frame = +1

Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
           K  QVGKV+ VYRKK+V++I+RIQREKANGAT  VGIHPSK  IVKLK++KDRK ILDR+
Sbjct: 63  KSQQVGKVIQVYRKKWVIHIDRIQREKANGATVSVGIHPSKVEIVKLKIDKDRKKILDRK 122

Query: 460 AKGRL 474
            + +L
Sbjct: 123 NRSKL 127



 Score = 84.6 bits (200), Expect = 9e-17
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = +3

Query: 93  MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
           MK N +V+          FSAPS +RR LMS+PLSKELRQK+NV+S+P+RKDDEVQV RG
Sbjct: 1   MKRNSEVSSSRRKSRKAHFSAPSSVRRKLMSAPLSKELRQKYNVRSIPVRKDDEVQVTRG 60

Query: 273 HYK 281
           H+K
Sbjct: 61  HFK 63


>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2631

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 246  DDEVQVVRGHYKVP--TGWQSDAGVS*KVCCI 335
            DD   + +GHY V   TG  +DAG +  VCC+
Sbjct: 1349 DDNSGMDKGHYDVTVYTGMSNDAGTTSTVCCL 1380


>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3287

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -1

Query: 501  YPCLGPSAAQSALCSAIEDCFAVFIHLQLDNHTL*RVNADICCXTIGLFS 352
            Y C  P       C  ++ CFA   H   +N T  R ++D  C  +G F+
Sbjct: 1826 YNCTCPGGYYGKQCETVDTCFA---HACKNNATCNRRDSDYTCTCVGNFA 1872


>SB_46751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 400

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 77  GEERQNEVQQAGDFLKK--EKQEEAFQCSFTYKASVDVLSPV*GTKTKIQ 220
           G E++    +A ++ KK  E  +  F C   Y  +V  +    GTKTKIQ
Sbjct: 163 GNEKKKFTYEALEYAKKSVELDDRDFACHKWYAITVSNVGDFEGTKTKIQ 212


>SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4554

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 68   CRFGEERQNEVQQAGDFLKKEKQEEAFQCSFTY 166
            C F EER    QQ G   K E+ ++AF  +  Y
Sbjct: 2583 CPFTEERMESFQQIGRTAKSEESDKAFGFNTIY 2615


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,044,980
Number of Sequences: 59808
Number of extensions: 341764
Number of successful extensions: 858
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)