Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_E04
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 100 6e-21
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 100 8e-21
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 100 8e-21
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 100 8e-21
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 99 1e-20
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 100 1e-20
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 100 1e-20
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 100 bits (240), Expect = 6e-21
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR-LGCTWAKTRVNTPRKLPQ 525
AK R +G +K + T K+ +
Sbjct: 123 AKSRQVGKEKSKYKEETIEKMQE 145
Score = 95.9 bits (228), Expect = 2e-19
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 100 bits (239), Expect = 8e-21
Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR-LGCTWAKTRVNTPRKLPQ 525
AK R +G K + T K+ +
Sbjct: 123 AKSRQVGKEKGKYKEETIEKMQE 145
Score = 95.9 bits (228), Expect = 2e-19
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 100 bits (239), Expect = 8e-21
Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR-LGCTWAKTRVNTPRKLPQ 525
AK R +G K + T K+ +
Sbjct: 123 AKSRQVGKEKGKYKEETIEKMQE 145
Score = 95.9 bits (228), Expect = 2e-19
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 100 bits (239), Expect = 8e-21
Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR-LGCTWAKTRVNTPRKLPQ 525
AK R +G K + T K+ +
Sbjct: 123 AKSRQVGKEKGKYKEETIEKMQE 145
Score = 95.9 bits (228), Expect = 2e-19
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 99 bits (238), Expect = 1e-20
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR-LGCTWAKTRVNTPRKL 519
AK R +G K + T K+
Sbjct: 123 AKSRQVGKEKGKYKEETIEKM 143
Score = 95.9 bits (228), Expect = 2e-19
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 99.5 bits (237), Expect = 1e-20
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR 471
AK R
Sbjct: 123 AKSR 126
Score = 95.5 bits (227), Expect = 2e-19
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 99.5 bits (237), Expect = 1e-20
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = +1
Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
K Q+GKV+ VYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+
Sbjct: 63 KGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
Query: 460 AKGR 471
AK R
Sbjct: 123 AKSR 126
Score = 95.5 bits (227), Expect = 2e-19
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 93 MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
MKFN VT F+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 273 HYK 281
HYK
Sbjct: 61 HYK 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,912,877
Number of Sequences: 237096
Number of extensions: 1578937
Number of successful extensions: 3273
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3259
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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