Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E04
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   103   2e-22
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   103   2e-22

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  103 bits (248), Expect = 2e-22
 Identities = 48/65 (73%), Positives = 55/65 (84%)
 Frame = +1

Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
           K  QVGKV+  YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAIL+RR
Sbjct: 63  KGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILERR 122

Query: 460 AKGRL 474
            KGRL
Sbjct: 123 GKGRL 127



 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = +3

Query: 93  MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
           MK N  V+          F APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 273 HYK 281
           H+K
Sbjct: 61  HFK 63


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  103 bits (248), Expect = 2e-22
 Identities = 48/65 (73%), Positives = 55/65 (84%)
 Frame = +1

Query: 280 KCXQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRR 459
           K  QVGKV+  YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAIL+RR
Sbjct: 63  KGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILERR 122

Query: 460 AKGRL 474
            KGRL
Sbjct: 123 GKGRL 127



 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = +3

Query: 93  MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
           MK N  V+          F APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 273 HYK 281
           H+K
Sbjct: 61  HFK 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,830,486
Number of Sequences: 53049
Number of extensions: 497754
Number of successful extensions: 1065
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)