Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E04
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical pr...    86   3e-17
Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical p...    67   2e-11
Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical pr...    67   2e-11
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    33   0.20 
AC006674-1|AAK68390.1|  388|Caenorhabditis elegans Nuclear hormo...    31   0.80 
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    29   5.7  
Z81075-7|CAI79229.1|  342|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z81075-3|CAI79228.1|  192|Caenorhabditis elegans Hypothetical pr...    28   9.9  
Z81075-2|CAB03048.1|  368|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AL032645-3|CAI79264.1|  342|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical
           protein F28C6.7a protein.
          Length = 142

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 35/59 (59%), Positives = 51/59 (86%)
 Frame = +1

Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 471
           G+V+  YRKKFV++I++I REKANG+T ++GIHPSK  I KLK++KDR+A+++R+A GR
Sbjct: 67  GRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGR 125



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = +3

Query: 93  MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
           MK N  V+          F+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG
Sbjct: 1   MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60

Query: 273 HYKVPTG 293
            +K  TG
Sbjct: 61  RHKGNTG 67


>Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical
           protein F28C6.7c protein.
          Length = 109

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = +3

Query: 93  MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
           MK N  V+          F+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG
Sbjct: 1   MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60

Query: 273 HYKVPTG 293
            +K  TG
Sbjct: 61  RHKGNTG 67



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 23/36 (63%), Positives = 32/36 (88%)
 Frame = +1

Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSK 402
           G+V+  YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 67  GRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102


>Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical
           protein F28C6.7b protein.
          Length = 106

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = +3

Query: 93  MKFNKQVTXXXXXXXXXXFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 272
           MK N  V+          F+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG
Sbjct: 1   MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60

Query: 273 HYKVPTG 293
            +K  TG
Sbjct: 61  RHKGNTG 67



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 23/36 (63%), Positives = 32/36 (88%)
 Frame = +1

Query: 295 GKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSK 402
           G+V+  YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 67  GRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 507 CIYPCLGPSAAQSALCSAIEDCFAVFIHLQLDNHTL*RVNADICCXTIGLF 355
           C++P    S + + +C  ++DC  V + L   +H   R+  + C   +GLF
Sbjct: 702 CVHPSCQYSISSNGVCGCLQDCGGVML-LDTQSHPKWRMTCNKCPSVVGLF 751


>AC006674-1|AAK68390.1|  388|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 119 protein.
          Length = 388

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 576 FKNFMYLKNYLFKRPPXLWQFPRCIYPCLGPSAAQ 472
           F NF++LKN+L  +     +F +CI   + P A +
Sbjct: 79  FSNFLFLKNFLIPKTSRFCRFKKCIEVGMDPKAVR 113


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -2

Query: 428 FIFNLTITHFEG*MPTYAVAPLAFSL*ILSMYTTNFLRYTXITLPTCXHFVVSTYNLNFI 249
           F++   +++ E   PT+  A  +  L I + +TT FLR   + + +C  F  +T +L  +
Sbjct: 432 FLYFSLLSNTESCPPTFVAAVNSKILNIPAAFTTKFLRIIDLVI-SCKKF--ATCHLPAL 488

Query: 248 VFANRHGFY 222
           +   RH F+
Sbjct: 489 IHVARHCFW 497


>Z81075-7|CAI79229.1|  342|Caenorhabditis elegans Hypothetical
           protein F35C12.3c protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 364 WPFLFESSQCIQQTFYDTPASLC 296
           W  +F  ++CI  TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239


>Z81075-3|CAI79228.1|  192|Caenorhabditis elegans Hypothetical
           protein F35C12.3b protein.
          Length = 192

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 364 WPFLFESSQCIQQTFYDTPASLC 296
           W  +F  ++CI  TF + P SLC
Sbjct: 67  WRCMFAQNKCIGTTFQNIPISLC 89


>Z81075-2|CAB03048.1|  368|Caenorhabditis elegans Hypothetical
           protein F35C12.3a protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 364 WPFLFESSQCIQQTFYDTPASLC 296
           W  +F  ++CI  TF + P SLC
Sbjct: 243 WRCMFAQNKCIGTTFQNIPISLC 265


>AL032645-3|CAI79264.1|  342|Caenorhabditis elegans Hypothetical
           protein F35C12.3c protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 364 WPFLFESSQCIQQTFYDTPASLC 296
           W  +F  ++CI  TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,331,333
Number of Sequences: 27780
Number of extensions: 257238
Number of successful extensions: 581
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)