Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_E02
(887 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 1e-28
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 104 8e-23
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 72 7e-13
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 56 5e-08
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 31 1.2
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 30 2.9
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 29 3.8
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 5.0
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 6.6
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 124 bits (299), Expect = 1e-28
Identities = 56/118 (47%), Positives = 74/118 (62%)
Frame = +1
Query: 418 CRRPWNNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEG 597
C +L YLDLYLIHWP ++++ FP D+ G + ++ D DTWKAME LV EG
Sbjct: 91 CVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEG 150
Query: 598 LVKSIGVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYSP 771
LVK+IG+SNFNSKQ++ + A +KPV N VECHP LN +L + + YSP
Sbjct: 151 LVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLIDHHKKHNIQTIAYSP 208
Score = 111 bits (266), Expect = 1e-24
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P GLGTWKSKPG+V AVK AI GYRHIDCAY Y NEKEVG+A+ ++ VV R+DL
Sbjct: 13 PVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDAL-RELLGSVVERKDL 71
Query: 360 FITSKLWNTFHRPDLVRGALQETLEQSELSVL 455
FITSKLWNT H P VR ++L+ L L
Sbjct: 72 FITSKLWNTKHNPKDVRSNCVDSLKDLGLDYL 103
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 104 bits (250), Expect = 8e-23
Identities = 52/110 (47%), Positives = 69/110 (62%)
Frame = +1
Query: 418 CRRPWNNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEG 597
C+ NL YLDLYLIH P A+K+ L + G I ++ +TW+AME LV +G
Sbjct: 132 CQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQNTWQAMEGLVAKG 191
Query: 598 LVKSIGVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRG 747
L K+IGVSNF+ K+L +LL A + P N VE HPYL ++LKEFC +G
Sbjct: 192 LCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSKG 241
Score = 101 bits (241), Expect = 1e-21
Identities = 47/86 (54%), Positives = 60/86 (69%)
Frame = +3
Query: 198 TWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 377
TW+S EV AV+ AI++GYRHIDCA +YGNE E+GEA++ + EG V RE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 378 WNTFHRPDLVRGALQETLEQSELSVL 455
W H PD V A Q TL+ +L L
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYL 144
Score = 52.0 bits (119), Expect = 6e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 192 LGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 356
L TW S G+V AV+ A ++GYR IDCA ++GNE GEA++ + +G V RE+
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 71.7 bits (168), Expect = 7e-13
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +1
Query: 556 VDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFC 735
V +W+AM L GL++SIGVSNFN + LE L V P VN +E HP+L K L ++C
Sbjct: 175 VGSWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQMKELTQYC 234
Query: 736 XXRGVXIXXYSP 771
+ I +SP
Sbjct: 235 KRHNITIQAFSP 246
Score = 37.1 bits (82), Expect = 0.019
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +3
Query: 228 QAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFH 392
QAV A++ GYR ID A Y NE+ VGEA ++ + R ++++ +K++ T H
Sbjct: 90 QAVLWALESGYRLIDTASRYHNEQSVGEA----VRCSNIPRCEIYVVTKVYFTEH 140
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 56.0 bits (129), Expect = 4e-08
Identities = 34/110 (30%), Positives = 56/110 (50%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 618
L+ Y+DL+LIH K T G+ + + + ++WKAME L ++G ++S+GV
Sbjct: 420 LSTDYIDLFLIH----SKTCDDFLLTCAEGEPRGT---WKESWKAMEELHRQGKIRSLGV 472
Query: 619 SNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYS 768
SNFN +L+ L+ A V P+ ++ + FC G+ YS
Sbjct: 473 SNFNVDELQELVNFATVPVSAVQNWFDPFHQDRKARRFCNKHGIRYIGYS 522
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P FGLG + QAV A++ GYR ID A Y NEK VGEA ++E V R ++
Sbjct: 10 PRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEA----LRESAVPRSEV 65
Query: 360 FITSKLWNTFH 392
++ +K+++T H
Sbjct: 66 YLVTKVYHTDH 76
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 54.4 bits (125), Expect = 1e-07
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +1
Query: 556 VDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFC 735
+ + A+ L +EGL++S+GVSNF LE L P +N +E +P+ + + ++C
Sbjct: 133 IAAYDALLTLKEEGLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYC 192
Query: 736 XXRGVXIXXYSP 771
G+ + Y+P
Sbjct: 193 NKHGITVEGYAP 204
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +3
Query: 243 AIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 377
A+ GYR +D A +Y NEKEVG A+ K G + RED+++T+KL
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR---KSG-LKREDIYVTTKL 93
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 34.7 bits (76), Expect = 0.10
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 538 FSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLXHAXVKPVVNXVE---CHPYL 708
+SD Y+D + L EG ++ I ++NF++ +++ + H +K N ++
Sbjct: 32 YSDKRYLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDHG-IKISSNQIQFSLIDRRA 90
Query: 709 NXKRLKEFCXXRGVXIXXY 765
N K +K FC G+ + Y
Sbjct: 91 NEKMVK-FCLDHGISLLAY 108
>SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 475 WPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLL 654
W + E SLFP + Y TW++++P + + K I + SK ER+
Sbjct: 69 WSFDWDEGASLFPDFFPRSTTAKTLSYEVTWRSLDPAKEYSMAKDIFRDSILSKDTERIE 128
Query: 655 XHAXVKPVV 681
+ K ++
Sbjct: 129 PDSEAKQII 137
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 31.5 bits (68), Expect = 0.94
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 482 RPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCXXT 661
R +T+LSSR ++ + SR G+ SRS +S S S + +R RG +
Sbjct: 637 RSRSRTSLSSRSRSRDRGGSRR------GKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRS 690
Query: 662 RXSSRSXIXWNVILTSTXNASRS 730
R SRS + L+ + + SRS
Sbjct: 691 RRRSRSSSHSSSSLSRSRSRSRS 713
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 473 TGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWR 646
T PR R+T LS R + S+ S T + +++RV E+PTS+ +SW+
Sbjct: 208 TSPRQKRETLLSRRRSTGESSTQEDS---TGDDTSTSATERVRRAVLEAPTSSENSWK 262
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 29.9 bits (64), Expect = 2.9
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +2
Query: 470 YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRG 649
Y + +R+ SSR T++ +S R+ P R WSRS S +S S + T W
Sbjct: 323 YRALQRSRQHKPSSRNTSRSRSPVRSRSPIHP-RSWSRSVSHSLSHSSASRSPTPEDW-- 379
Query: 650 CXXTRXSSRSXIXWNVILTSTXNASR 727
+R SRS + TS + SR
Sbjct: 380 -DRSRTPSRSPTPDSRSQTSNGDKSR 404
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 436 NLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 615
NL +L LI + KE + +G++ D WKAMEP V+ + + I
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEHIA 435
Query: 616 VSNFNSKQLE 645
S LE
Sbjct: 436 RDEGESPSLE 445
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 473 TGPRPTRKTALSSRPTNQVKSSSR--TSITWTPGRLWSRSSKRVWSRASESPTSTR 634
T +++++ + RPT++ + SR T WTPGR + +R + +PT R
Sbjct: 127 TAEDTSKESSKAKRPTSRPRPPSRLLTKRAWTPGRRTPFACRRAPTPGRRTPTPGR 182
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 204 KSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 332
KS P G + V A + YRH +Y++G++ EV T +K
Sbjct: 6 KSHPIGTIAVGVAIAAAVYYRHSIKSYIFGDDNEVSALATCVVK 49
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 195 GTWKSKPGEVTQAVKDAIDIGYRHIDCA 278
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 28.3 bits (60), Expect = 8.8
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +2
Query: 290 KREGSRRS---YNQQN*GRSRNEGRSVHNFETVEHVSSPGLGARCPAGDPGTI*TFSTWI 460
KR RRS Y+ ++ S + S H+ + H S G G+R + + S
Sbjct: 187 KRRSPRRSSSSYSSRSRSSSSSSSGSSHSSRSQSHTPSSGSGSRNSSRSASRSQSHSV-- 244
Query: 461 CT*YTGPRPTRKTALSSRPTNQVKSSSRT-SITWTPGRLWSRSSKRVWSRASESPTSTRS 637
R K+ SR +Q S+SR+ S + + R SRS R S + S +RS
Sbjct: 245 ------SRSRSKSLSQSRSRSQSHSASRSVSRSRSRSRSGSRSRTRSHSPSDHSSVGSRS 298
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,101,165
Number of Sequences: 59808
Number of extensions: 436471
Number of successful extensions: 1346
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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