Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_E02
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 128 7e-30
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 128 7e-30
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 105 4e-23
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 100 1e-21
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 75 9e-14
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 59 5e-09
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 41 0.001
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.4
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 3.4
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 3.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 4.4
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 4.4
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 4.4
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 128 bits (308), Expect = 7e-30
Identities = 54/113 (47%), Positives = 74/113 (65%)
Frame = +1
Query: 433 NNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSI 612
++L Y+DL LIHWPQ Y E LFP ++GK+++SDVDY++TWKA E K G +SI
Sbjct: 98 SDLQLSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSI 157
Query: 613 GVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYSP 771
G+SNF Q++R+ A VKP VE HPY +L+EFC +G+ + YSP
Sbjct: 158 GLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGIVVVGYSP 210
Score = 112 bits (269), Expect = 4e-25
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG V RE+L
Sbjct: 14 PAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREEL 73
Query: 360 FITSKLWNTFH 392
FITSK+WNTFH
Sbjct: 74 FITSKVWNTFH 84
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 128 bits (308), Expect = 7e-30
Identities = 54/113 (47%), Positives = 74/113 (65%)
Frame = +1
Query: 433 NNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSI 612
++L Y+DL LIHWPQ Y E LFP ++GK+++SDVDY++TWKA E K G +SI
Sbjct: 98 SDLQLSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSI 157
Query: 613 GVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYSP 771
G+SNF Q++R+ A VKP VE HPY +L+EFC +G+ + YSP
Sbjct: 158 GLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGIVVVGYSP 210
Score = 112 bits (269), Expect = 4e-25
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P GLGTW+SKPGEV A+K A+ GYRHIDCA+VY N+KEVGEA+ + EG V RE+L
Sbjct: 14 PAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREEL 73
Query: 360 FITSKLWNTFH 392
FITSK+WNTFH
Sbjct: 74 FITSKVWNTFH 84
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 105 bits (252), Expect = 4e-23
Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYK-EDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 615
L +Y+DLYLIH P +K ++GS P ++G++ +++ ++DTW+A+E L KEG +K++G
Sbjct: 102 LQLEYIDLYLIHCPFPFKHQEGSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALG 161
Query: 616 VSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYSP 771
VSNF+ QL+ L A VKP VECH Y + L+ C GV + Y+P
Sbjct: 162 VSNFSCNQLQALYDAAEVKPANQQVECHIYWPQQELRALCKKLGVTVTAYAP 213
Score = 78.2 bits (184), Expect = 7e-15
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +3
Query: 180 PXFGLGTWKSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 356
P FGLGTW+ K E+T A++ A+D GYR ID A++Y NE +G+ + I G + RED
Sbjct: 15 PLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSGKLKRED 74
Query: 357 LFITSKLWNTFHRPDLVRGALQETLEQSELSVL 455
+F+TSKL T H P+ V ++ L+ +L +
Sbjct: 75 IFVTSKLPFTAHAPEDVPKCVESQLKALQLEYI 107
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 100 bits (240), Expect = 1e-21
Identities = 42/110 (38%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Frame = +1
Query: 451 YLDLYLIHWPQAYKEDG-----SLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 615
Y+DL +IHWP + ED L+P +GK+++SDVDY++TWKA+E + G ++SIG
Sbjct: 106 YMDLIVIHWPFGWAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIG 165
Query: 616 VSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXY 765
++NFN Q+E++ +KP V VE +P+L+ + +++FC +G+ + +
Sbjct: 166 LANFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQFCREKGIILTAF 215
Score = 75.4 bits (177), Expect = 5e-14
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P G GTW+ + V+DA++ GYRHID A + N++EV I K V RE+L
Sbjct: 16 PVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRKVRREEL 75
Query: 360 FITSKLWNTFHRPDLVRGALQETLEQSELSVL 455
F++SK+WNT+H + + E LE E + +
Sbjct: 76 FLSSKIWNTYHSRNRCMQQIDEMLEIFETTYM 107
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 94.3 bits (224), Expect = 1e-19
Identities = 45/89 (50%), Positives = 59/89 (66%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P GLGTW+S P EV AVK A+ GYR ID A VY NE+ +G AI ++EGVV RE+L
Sbjct: 17 PVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREEL 76
Query: 360 FITSKLWNTFHRPDLVRGALQETLEQSEL 446
FIT+K W P + G L+E+L++ +L
Sbjct: 77 FITTKAWTHELAPGKLEGGLRESLKKLQL 105
Score = 59.3 bits (137), Expect = 4e-09
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +1
Query: 421 RRPWNNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 600
R L +Y+DLYL H P A+ +D S I S V+ D W+ + + K GL
Sbjct: 97 RESLKKLQLEYVDLYLAHMPAAFNDD-------MSEHIA-SPVE--DVWRQFDAVYKAGL 146
Query: 601 VKSIGVSNFNSKQLERLLXHAXVKPVVN-XVECHPYLNXKRLKEFCXXRGVXIXXYS 768
K++GVSN+N+ Q+ R L + PV N VE H Y +FC + + Y+
Sbjct: 147 AKAVGVSNWNNDQISRALA-LGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYA 202
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 80.2 bits (189), Expect = 2e-15
Identities = 37/91 (40%), Positives = 57/91 (62%)
Frame = +3
Query: 174 LFPXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 353
L P GLGTW+ E +++A+ GYRHID A +Y NE ++G+A+ EG++ RE
Sbjct: 15 LMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALAELFAEGILKRE 74
Query: 354 DLFITSKLWNTFHRPDLVRGALQETLEQSEL 446
D+FIT+K + PD+V AL+ +L++ L
Sbjct: 75 DIFITTKAFCHEVAPDVVEEALRNSLKRLRL 105
Score = 70.1 bits (164), Expect = 2e-12
Identities = 41/116 (35%), Positives = 55/116 (47%)
Frame = +1
Query: 421 RRPWNNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 600
R L Y+DLYL H P + K+DGS SDV D W+ E + GL
Sbjct: 97 RNSLKRLRLDYVDLYLAHIPASTKDDGSFR----------SDVKVEDIWRGFEKVYGLGL 146
Query: 601 VKSIGVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYS 768
K+IGVSNFN Q+ R++ V + +E H YL K +E C + I Y+
Sbjct: 147 TKAIGVSNFNESQIVRIMNIQKVPIHASQLELHLYLPQKAHRELCKKHNILITAYA 202
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 74.5 bits (175), Expect = 9e-14
Identities = 40/76 (52%), Positives = 47/76 (61%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P GLGTW+S +V AVK A+ GY ID A Y NE+ +G AI I EGVV REDL
Sbjct: 57 PAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDL 116
Query: 360 FITSKLWNTFHRPDLV 407
FIT+K+ N F LV
Sbjct: 117 FITTKVPNLFSSLRLV 132
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/111 (32%), Positives = 59/111 (53%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 618
L+ +YLDL L+H+P+ P D + + + DTW A+E L EG ++SIGV
Sbjct: 99 LDRKYLDLVLVHYPR---------PLDTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGV 149
Query: 619 SNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYSP 771
SN+ +E + + ++P VN +E HP+ K L+ +C + +SP
Sbjct: 150 SNYEPHHIEEMRSYITIEPQVNQIEYHPHFQRKVLRAYCNKNEILFQAFSP 200
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P LGT+++K ++ AV +A+ +GYR D A Y NEK++G A+ + + + ED+
Sbjct: 11 PKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNICSEDI 70
Query: 360 FITSKL--WNTFHRPDLVRGALQETLE 434
++TSK+ +++ + +L+R + E+LE
Sbjct: 71 YLTSKVFPYSSKNAAELIRKDVNESLE 97
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/112 (34%), Positives = 57/112 (50%)
Frame = +1
Query: 433 NNLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSI 612
+NL +YLDL LIHWP GS ++ + V++W M ++ EG ++S+
Sbjct: 97 SNLKVEYLDLLLIHWP------GSSLKSENPANKKLR----VESWNVMCEMMAEGKLRSV 146
Query: 613 GVSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYS 768
GVSNF LE L + V P VN VE HP+ + L ++C + YS
Sbjct: 147 GVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQDDLVKYCNENNIHFQAYS 198
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +3
Query: 156 RSTMEXLFPXFGLGTWKSKPGEVTQAVKDA-IDIGYRHIDCAYVYGNEKEVGEAITSKIK 332
R ++ P G+GTW+ + E+ + V DA GYR ID A VY NE ++G + +
Sbjct: 4 REYVKNNMPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLP 63
Query: 333 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLEQSELSVL 455
+ RED++ITSKL + R +++E+L ++ L
Sbjct: 64 ANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYL 104
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/110 (34%), Positives = 58/110 (52%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 618
L Y+DL LIH+P+ ++ G+ D +I S V W+ +E + G V+SIGV
Sbjct: 109 LQTDYVDLLLIHYPRD-RDTGN----DDDYEINKSRRKIV--WQTLEKAKESGRVRSIGV 161
Query: 619 SNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYS 768
SN+ L + +A ++PV+N E PYL LK+FC + + YS
Sbjct: 162 SNYEVYHLVEMFEYAKIRPVLNQYEYQPYLTRPTLKKFCDLNNIVVQSYS 211
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 PXFGLGTWKSKPGE-VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 356
P GLG + + + + +++ A+ GYR D A +Y NE +G ++ + + +TRED
Sbjct: 21 PKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQFGLTRED 80
Query: 357 LFITSKL 377
+FIT+K+
Sbjct: 81 VFITTKV 87
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 618
L YLD+Y+IH PQ D + + K TW+ ME L ++ V+SIGV
Sbjct: 95 LQTDYLDMYMIHMPQL--PDWIVNQKETKEK----------TWRQMELLYEDEHVRSIGV 142
Query: 619 SNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYSP 771
SN++ + L+ LL A + P N VE HP+ + LK +C G+ Y P
Sbjct: 143 SNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCP 193
Score = 44.8 bits (101), Expect = 8e-05
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAID-IGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 356
P GLGT S G AV +I GYR ID A YG EK++G A +K V RE+
Sbjct: 14 PLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIA----VKNCSVPREE 68
Query: 357 LFITSKLWNTFHRPDLVRGALQETLEQSELSVL 455
+F+++KLW D V A Q + E+ + L
Sbjct: 69 MFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYL 100
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/111 (28%), Positives = 54/111 (48%)
Frame = +1
Query: 436 NLNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 615
+L Y+D+YL+H+P+ D D ++ + Y + +E G V+SIG
Sbjct: 108 SLQTDYIDMYLVHYPKPNDSDN-----DDVNNAEYRKIAY----EVLEEAKAAGKVRSIG 158
Query: 616 VSNFNSKQLERLLXHAXVKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYS 768
VSN+ LE L +A V P N +E HP+ L+++C + + +S
Sbjct: 159 VSNYEIVHLEELKTYAKVPPCANQLEYHPHFARIPLQKYCKEKNIFFQAFS 209
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P G GT+K V A+ A+ GYR D A Y NEKE+GEA+ + + ++R D+
Sbjct: 22 PFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHGLSRSDV 81
Query: 360 FITSKLW-NTFHRPDLVRGALQETLE 434
F+TSK + + + + RG ++E+L+
Sbjct: 82 FLTSKFFPESKNCREACRGFVEESLQ 107
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +3
Query: 180 PXFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 359
P GLGT+K +V + A+ GYR D A VY NEKE+G+A+ + + + RED+
Sbjct: 12 PLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNLKREDI 71
Query: 360 FITSKL 377
FIT+K+
Sbjct: 72 FITTKM 77
Score = 58.0 bits (134), Expect = 8e-09
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 618
L Y+D+YLIH+P+++ + G P +++ +I TW + G ++S+GV
Sbjct: 96 LKTSYIDMYLIHYPKSF-DYGDQDPMNKTLRIA--------TWNDLWECKNAGKIRSVGV 146
Query: 619 SNFNSKQLERLLXHAX-VKPVVNXVECHPYLNXKRLKEFCXXRGVXIXXYS 768
S+F + LE L P N VE HP+ + LK +C G+ +S
Sbjct: 147 SSFEIRHLEELKDLGKNFPPCCNQVEYHPHFTREELKNYCKSEGIFFQAFS 197
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +1
Query: 439 LNFQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 618
L+ +Y+DLYL H P A+ +D S KI+ S V+ D W+ + + K GL K++GV
Sbjct: 73 LHLEYVDLYLAHMPTAFSDD-------MSQKIE-SSVE--DIWRQFDAVYKAGLAKAVGV 122
Query: 619 SNFNSKQL 642
SN+N+ Q+
Sbjct: 123 SNWNNDQI 130
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 574 MEPLVKEGLVKSIGVSNFNSKQLERLLXHAXVKPVVNXV 690
ME LV+ + SIGVS+F+++QL+ ++ H VKP +N V
Sbjct: 149 MEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHV 187
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 3.4
Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Frame = +2
Query: 371 ETVEHVSSPGLGARCPAGDPGTI*TFSTWICT*YTGPRPTRKTALSSRPTNQVKSSSRTS 550
++ V S GA +G PGT T + P P+ S T+ V S+
Sbjct: 995 QSTSPVESSTSGATSSSGSPGTTLTSIS------PSPSPSSTIGSSQGSTSPVVSTISQG 1048
Query: 551 ITWTPGRLWSRSSK--RVWSRASESPTSTRSSWRGCXXTRXSSRSXIXWNVILTSTXNAS 724
T TPG S +K V AS T+T S + SS S ST A+
Sbjct: 1049 STETPGSTGSTVTKPSTVSGSASSGSTATMGSTEASSTSGGSSTSPNPSQSTSPSTSGAT 1108
Query: 725 RS 730
S
Sbjct: 1109 SS 1110
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 512 RPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTST 631
RP + +S SR+ TP R W+R+ R S+A S T T
Sbjct: 358 RPVRRSRSRSRSR---TPNRNWTRARSRTRSQAKSSSTLT 394
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 479 PRPTRKTALSSRPTNQVKSSSRTSITWTPG 568
P TRK S P+ ++S SR S T TPG
Sbjct: 475 PPVTRKVRKSMMPSESIRSVSRNSSTSTPG 504
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 496 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 621
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5915 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 5956
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 496 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 621
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5960 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 6001
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 496 DGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVS 621
DGS PTD SG + D + + T PL K+GL S S
Sbjct: 5960 DGSPLPTDDSGAVIGPDGEVIPTDSNGIPLNKDGLPLSTDAS 6001
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 464 T*YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRS 637
T + G RP + S+ + +V+ R S TW+ R SRS R R+ E S +S
Sbjct: 42 TDFVGKRPKKHHRHKSKKSKKVR---RRSKTWSSSRSRSRSRSRSRGRSQERRRSRKS 96
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 410 RCPAGDPGTI*TFS----TWICT*YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLW 577
+CPA P TI T S + T T T ++S PT + S++ TS +
Sbjct: 145 KCPATTPSTISTTSGASSSTASVSSTILSSTATTMVTSTPTTEKSSTTTTSTPTSEATST 204
Query: 578 SRSSKRVWSRASESPTSTRSSWRGC 652
+ + S +E+PT+T + C
Sbjct: 205 TTAMITTTSGTTENPTTTDCPTKVC 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,344,074
Number of Sequences: 27780
Number of extensions: 321804
Number of successful extensions: 1557
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -