Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E01
         (841 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U54982-1|AAC16665.1|  850|Drosophila melanogaster stn-A protein.       29   6.0  
AE014298-3233|ABI31011.1|  850|Drosophila melanogaster CG12500-P...    29   6.0  
AE014298-3232|EAA46058.2|  850|Drosophila melanogaster CG12500-P...    29   6.0  

>U54982-1|AAC16665.1|  850|Drosophila melanogaster stn-A protein.
          Length = 850

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 162 HQREDEASKXVRNAFYRXDESAEXXKRPRQEXATRTRXRSKXEEGPR 22
           H+ +DE  +  + +FY+   SA   K+ ++E A R     +  E  R
Sbjct: 114 HKTQDELDRIKKESFYQRLPSAAEKKKQKEEEAARLEAEQQEREKQR 160


>AE014298-3233|ABI31011.1|  850|Drosophila melanogaster CG12500-PB,
           isoform B protein.
          Length = 850

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 162 HQREDEASKXVRNAFYRXDESAEXXKRPRQEXATRTRXRSKXEEGPR 22
           H+ +DE  +  + +FY+   SA   K+ ++E A R     +  E  R
Sbjct: 114 HKTQDELDRIKKESFYQRLPSAAEKKKQKEEEAARLEAEQQEREKQR 160


>AE014298-3232|EAA46058.2|  850|Drosophila melanogaster CG12500-PA,
           isoform A protein.
          Length = 850

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 162 HQREDEASKXVRNAFYRXDESAEXXKRPRQEXATRTRXRSKXEEGPR 22
           H+ +DE  +  + +FY+   SA   K+ ++E A R     +  E  R
Sbjct: 114 HKTQDELDRIKKESFYQRLPSAAEKKKQKEEEAARLEAEQQEREKQR 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,695,922
Number of Sequences: 53049
Number of extensions: 212844
Number of successful extensions: 380
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)