Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D22
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230...    47   2e-05
06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936...    40   0.003
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311...    34   0.18 
01_05_0451 - 22361617-22361811,22362728-22362842,22363443-223635...    31   1.3  
11_05_0091 - 18982390-18982948,18983088-18983173                       29   6.8  

>03_02_0752 -
           10922456-10922644,10922719-10922796,10922888-10923016,
           10923105-10923152,10923243-10923333,10923517-10923648,
           10923869-10924086,10925121-10925271,10925360-10926009,
           10926715-10926786,10926938-10926985,10927105-10927242,
           10927750-10927756,10928064-10928212
          Length = 699

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = +1

Query: 139 DQTMHSFHALFCRRCFKYDCFLHRLQACHPRPNLSKRKGPDLKPFSEPCGPNCYM 303
           D  + SF  LFCRRC  +DC LH        P+  +  G +L     PCG  CY+
Sbjct: 83  DVALDSFDNLFCRRCLVFDCRLHGCSQNLVFPSEKQPYGHELDENKRPCGDQCYL 137


>06_01_1133 +
           9364842-9364850,9364929-9365048,9365157-9365476,
           9366267-9366428,9367151-9367235,9367352-9367501,
           9367588-9367635,9367705-9367773,9367897-9368600,
           9369426-9369561,9369636-9369856,9370355-9370486,
           9371316-9371406,9371878-9371925,9372004-9372132,
           9372357-9372626
          Length = 897

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 139 DQTMHSFHALFCRRCFKYDCFLHRLQACHPRPNLSKRKGPDLKPFSE--PCGPNCYMLL 309
           D  + SF  LFCRRC  +DC LH    C         K   L    E  PCG +CY L+
Sbjct: 267 DAALDSFDNLFCRRCLVFDCKLH---GCSQDLVFPTEKQAPLCSSDEGTPCGIHCYKLV 322



 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +1

Query: 829 CPCLXXXXXXXKXCXXXXXCXNXFXGC 909
           CPCL       K C     C N F GC
Sbjct: 661 CPCLTNGTCCEKYCGCPKMCKNRFRGC 687


>05_03_0645 +
           16529635-16529794,16530188-16530312,16531100-16531173,
           16531961-16532006,16532638-16532730,16534429-16535886
          Length = 651

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = -2

Query: 281 GSEKGLRSGPLRFDRLGRGWHACSRCRKQSYLKQRRQKSAWKECMVWSRGTGXASGPST- 105
           GS   LRS     DRL   W ACS  R  + +      S+ +    WS GTG  SG    
Sbjct: 471 GSRGWLRSS---LDRLSGSWRACSGSRAVAAVAAPGCSSSRRTTGSWSPGTGSTSGRHLH 527

Query: 104 LGVXSXG 84
           LG  S G
Sbjct: 528 LGADSRG 534


>01_05_0451 -
           22361617-22361811,22362728-22362842,22363443-22363513,
           22363600-22363754,22363843-22363933,22364049-22364104,
           22364910-22365027,22365087-22365200,22365289-22365504
          Length = 376

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 227 GWHACSRCRKQSYLKQRRQKSAWK 156
           G   CSRCRK SY  ++ Q+  W+
Sbjct: 150 GEKVCSRCRKSSYCSKKHQELHWR 173


>11_05_0091 - 18982390-18982948,18983088-18983173
          Length = 214

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 221 ATRGPTCRSARDPTSSPSPSRAGPTAT-CCWTG 316
           + R P+ RS      SPSPS    +AT CC TG
Sbjct: 119 SARSPSSRSPLSLQPSPSPSPTPDSATPCCLTG 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,365,480
Number of Sequences: 37544
Number of extensions: 214804
Number of successful extensions: 965
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)