Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D21
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   10.0 

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 354  ISSGCELFMRVYYICQIRHKE 416
            I SGC +F    +IC + H++
Sbjct: 1161 ILSGCIIFTEGIWICSLIHRK 1181


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 464 RNILPLCNIIFSHSSKLFVSNLANVINPHKQFTPR 360
           RN+LP+ N+       + + NL N     K   PR
Sbjct: 660 RNMLPVRNVSVDVRDNILLKNLQNPSTGSKPGKPR 694


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 667 KLXVHHLTTMSGADTVMKTSNLL 599
           K  +HH   M+G  TVM + + +
Sbjct: 262 KTLMHHPVAMTGTKTVMPSQSAI 284


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -2

Query: 750 PIITISTCSM 721
           P++++STCSM
Sbjct: 75  PVVSLSTCSM 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,699
Number of Sequences: 336
Number of extensions: 3786
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)