Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D21
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22176-3|CAA80132.1|  305|Caenorhabditis elegans Hypothetical pr...    71   1e-12
Z81030-7|CAB02711.1|  366|Caenorhabditis elegans Hypothetical pr...    33   0.21 
U97009-12|ABR92602.1|  532|Caenorhabditis elegans Udp-glucuronos...    30   2.0  
U97009-11|AAC69026.1|  533|Caenorhabditis elegans Udp-glucuronos...    30   2.0  

>Z22176-3|CAA80132.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1098.4 protein.
          Length = 305

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
 Frame = +2

Query: 239 KTLLPVIENYKVSTVRELDLNLQLAVDAMRHCDQPCSSYLIWV*IV--YEGLLHLPN*TQ 412
           +TLL V++  + +TV E    L   V A+   D   +S      +   +  L       Q
Sbjct: 28  ETLLEVLDRSRATTVAEFQNELNQVVAALEKTDYSSTSIRSAADLFTRFTSLAPAALLDQ 87

Query: 413 RVLKNVKKLCYKEVIYFWDKLLEARGKSSKTGFVIHLRWM*NXXTFSV-KSCFTSNDRSY 589
                V  L  +    F   +  +R K SK   +     M N  T S  K    +   ++
Sbjct: 88  EDFSQVLDLYRQRARSFIKNVRGSRAKISKCARLFFTHHM-NILTHSYSKVVLETILDAH 146

Query: 590 KSKQKI*SLHHSICTGHSGEMMHXQLVAAGVDATLILXSAVGYVMEXVDIVMIGAEGVTE 769
           KS   +           SG+++  +L   GV  TL+L S VGYVME +  V++GAEGV E
Sbjct: 147 KSGYHLHVWVTESQPDASGKLVFEELKKNGVPTTLVLDSCVGYVMERIQAVLVGAEGVME 206

Query: 770 SGGIINXIGTYSLGIXXLXLXKPXYVLXES 859
           +GGIIN IGT ++ I       P YV  E+
Sbjct: 207 TGGIINKIGTVNVCIIAKSRHVPVYVCAET 236



 Score = 36.7 bits (81), Expect = 0.023
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 492 KVAKQALSFICDGCKIXXHSRSRVVLQAMIEAIKANKRFEVFITVSAPD 638
           K++K A  F      I  HS S+VVL+ +++A K+     V++T S PD
Sbjct: 114 KISKCARLFFTHHMNILTHSYSKVVLETILDAHKSGYHLHVWVTESQPD 162


>Z81030-7|CAB02711.1|  366|Caenorhabditis elegans Hypothetical
           protein C01G10.9 protein.
          Length = 366

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 662 QLVAAGVDATLILXSAVGYVMEX--VDIVMIGAEGVTESGGIINXIGTYSLGI 814
           +L+   V   LI  S   + M+   VD V+ GA+ V  +G   N IGTY L +
Sbjct: 227 ELLHGEVPFKLITDSMAAWAMKNHQVDCVLTGADNVARNGDTANKIGTYMLAV 279


>U97009-12|ABR92602.1|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform b protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = -3

Query: 509 SLFCYFSLVLLTACPRNILPLCNIIFSHSSKLFVSNLANVINPH 378
           +L     ++ L +C +NIL + N IF +S   FVS LAN+I  H
Sbjct: 5   NLLSILLVISLVSC-KNIL-VYNPIFGYSHAKFVSQLANIIADH 46


>U97009-11|AAC69026.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform a protein.
          Length = 533

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = -3

Query: 509 SLFCYFSLVLLTACPRNILPLCNIIFSHSSKLFVSNLANVINPH 378
           +L     ++ L +C +NIL + N IF +S   FVS LAN+I  H
Sbjct: 5   NLLSILLVISLVSC-KNIL-VYNPIFGYSHAKFVSQLANIIADH 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,840,553
Number of Sequences: 27780
Number of extensions: 355692
Number of successful extensions: 754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)