Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D21
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   5.0  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   5.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.8  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 493 FPSCF*QLVPEIYYLF 446
           F  C+ +L P  YYLF
Sbjct: 130 FNKCYAELSPRTYYLF 145


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 67  SPWVRRVIVSIL 102
           +PWVRRV + +L
Sbjct: 338 APWVRRVFIHVL 349


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 221 GCGLPSKTLLPVIENYK 271
           G    +KT LPV ENYK
Sbjct: 435 GFSQTNKTWLPVNENYK 451


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 139 GLNSWWFNGPNYQEL 95
           GL +W  N  NY EL
Sbjct: 12  GLENWRVNNSNYTEL 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,718
Number of Sequences: 438
Number of extensions: 4150
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)