Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D20
         (880 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;...    36   1.8  
UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xeno...    34   5.5  
UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|R...    33   7.2  
UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gamb...    33   7.2  
UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ ...    33   7.2  
UniRef50_A4RUB2 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   9.6  

>UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG4170-PA - Nasonia vitripennis
          Length = 437

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +3

Query: 720 DRAGRVLFDNXGKREFXRRSGS 785
           DR GR  FDN GKREF R+SGS
Sbjct: 200 DRVGRGGFDNRGKREFDRQSGS 221



 Score = 34.3 bits (75), Expect = 4.1
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           MEN+Y + V N+++L LD++ DPL+
Sbjct: 1   MENTYSITVTNKFSLALDEDEDPLE 25


>UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xenopus
           tropicalis|Rep: Hyaluronan binding protein 4 - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 339

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           M++++G  V NR+   LDDE+DPLD
Sbjct: 1   MQDNFGCAVENRFNQLLDDESDPLD 25


>UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|Rep:
           MGC68500 protein - Xenopus laevis (African clawed frog)
          Length = 404

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           M++++G  V NR+   LDDE+DPLD
Sbjct: 18  MQDNFGCAVGNRFHQLLDDESDPLD 42


>UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000009724 - Anopheles gambiae
           str. PEST
          Length = 445

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
 Frame = +2

Query: 230 MEN-SYGVGVVNRYALFL--DDETDPLD 304
           MEN SYG+ V NRY LF   DDE DP++
Sbjct: 1   MENTSYGINVANRYDLFCIDDDEGDPIE 28


>UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ
            family-like protein; n=3; Leishmania|Rep: ATP-dependent
            DEAD/H DNA helicase recQ family-like protein - Leishmania
            major
          Length = 1003

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 414  PPGRALRKLKM*SLKTSKVENNR-RVRDLHARSIVMLSVRLRVVVKIGR 557
            PPGR L K+K  SL  + VE NR R+   +     +L +R R +++ G+
Sbjct: 910  PPGRGLGKMKAVSLVNAFVEENRLRIHSTYEALRALLGIRPRSLIQHGK 958


>UniRef50_A4RUB2 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 551

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 24/68 (35%), Positives = 30/68 (44%)
 Frame = -3

Query: 365 LFRLLWSSF*APSPALALLTHQEDRSHRPRKERICSLLPHRRNSPL*SS**FNHTIFRCY 186
           + R LW+S   P  AL+L  HQE R   P    +C L  H   S L S       +F   
Sbjct: 321 IVRTLWASVLFPLAALSLAPHQEPRFLTPMILPMCVLAAHYSRSTLVSR---KRRLF-AI 376

Query: 185 WITFRALV 162
           WI   AL+
Sbjct: 377 WIAINALL 384


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,963,531
Number of Sequences: 1657284
Number of extensions: 9393649
Number of successful extensions: 17746
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17746
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)