Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D20
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018788-1|AAH18788.1|  308|Homo sapiens HABP4 protein protein.        33   1.8  
AL133477-5|CAI39621.1|  308|Homo sapiens hyaluronan binding prot...    33   1.8  
AL133477-4|CAI39620.1|  413|Homo sapiens hyaluronan binding prot...    33   1.8  
AF241831-1|AAF62546.1|  413|Homo sapiens intracellular hyalurona...    33   1.8  

>BC018788-1|AAH18788.1|  308|Homo sapiens HABP4 protein protein.
          Length = 308

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           M+ S+G  V NR+   LDDE+DP D
Sbjct: 16  MQESFGCVVANRFHQLLDDESDPFD 40


>AL133477-5|CAI39621.1|  308|Homo sapiens hyaluronan binding protein
           4 protein.
          Length = 308

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           M+ S+G  V NR+   LDDE+DP D
Sbjct: 16  MQESFGCVVANRFHQLLDDESDPFD 40


>AL133477-4|CAI39620.1|  413|Homo sapiens hyaluronan binding protein
           4 protein.
          Length = 413

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           M+ S+G  V NR+   LDDE+DP D
Sbjct: 16  MQESFGCVVANRFHQLLDDESDPFD 40


>AF241831-1|AAF62546.1|  413|Homo sapiens intracellular
           hyaluronan-binding protein protein.
          Length = 413

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 230 MENSYGVGVVNRYALFLDDETDPLD 304
           M+ S+G  V NR+   LDDE+DP D
Sbjct: 16  MQESFGCVVANRFHQLLDDESDPFD 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,230,724
Number of Sequences: 237096
Number of extensions: 1509421
Number of successful extensions: 2600
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2600
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)