Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D19
         (1103 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC2267 Cluster: UPI0000DC2267 related cluster; n...    39   0.20 
UniRef50_UPI0000DC0B02 Cluster: UPI0000DC0B02 related cluster; n...    39   0.26 
UniRef50_A2WQZ0 Cluster: Putative uncharacterized protein; n=2; ...    34   5.7  
UniRef50_UPI0000F21B21 Cluster: PREDICTED: hypothetical protein,...    33   9.9  
UniRef50_A0ECF9 Cluster: Chromosome undetermined scaffold_9, who...    33   9.9  
UniRef50_A0D0L0 Cluster: Chromosome undetermined scaffold_33, wh...    33   9.9  

>UniRef50_UPI0000DC2267 Cluster: UPI0000DC2267 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC2267 UniRef100 entry -
           Rattus norvegicus
          Length = 256

 Score = 39.1 bits (87), Expect = 0.20
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +2

Query: 62  KGRXGEXGRX-RQKXXEKXGEXGGXGERXGXXXXEKEXKRXKXKREXEXKEGEXEXXXEX 238
           K + GE GR  +++  E+ GE GG GER G    E+E +R + +RE E +E E E   E 
Sbjct: 68  KRKEGEEGREGKEEGGERRGE-GGEGEREGERERERERERER-EREEEKEEKEEEKEEEE 125

Query: 239 XXXXKRE 259
               + E
Sbjct: 126 EGEAEEE 132


>UniRef50_UPI0000DC0B02 Cluster: UPI0000DC0B02 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0B02 UniRef100 entry -
           Rattus norvegicus
          Length = 230

 Score = 38.7 bits (86), Expect = 0.26
 Identities = 23/64 (35%), Positives = 32/64 (50%)
 Frame = +2

Query: 68  RXGEXGRXRQKXXEKXGEXGGXGERXGXXXXEKEXKRXKXKREXEXKEGEXEXXXEXXXX 247
           R  E  R R+K  E+  E GG  ER      E+E +R K +++ E KEGE E   +    
Sbjct: 157 REREREREREKGRERRRE-GGRKEREREREREREREREKERKKGEGKEGEREREEKGKKE 215

Query: 248 XKRE 259
            K+E
Sbjct: 216 RKKE 219


>UniRef50_A2WQZ0 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 961

 Score = 34.3 bits (75), Expect = 5.7
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 120 RXEXXEKXEAXRXXKKRXKEXKXKEKXRXKREXXKXXXRXXXXGKEKXK 266
           R E   + E  R  K+R KE + KEK R ++E  K   R    GK++ +
Sbjct: 804 REEEKARKEKEREEKERRKEKEKKEKERKEKERDKEKEREKDKGKDRSR 852


>UniRef50_UPI0000F21B21 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
           protein, partial - Danio rerio
          Length = 219

 Score = 33.5 bits (73), Expect = 9.9
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +2

Query: 62  KGRXGEXGRXRQKXXEKXGEXGGXGERXGXXXXEKEXKRXKXKREXEXKEGEXEXXXEXX 241
           +G   E GR  ++  +K    GG GER      E++ +R +  +E E   GE E      
Sbjct: 124 RGTGKERGREGKRKTKKGKNEGGRGEREERGKKEQKRQRREKAKEKEEGGGEGEAGATGK 183

Query: 242 XXXKRE 259
              +RE
Sbjct: 184 ERRRRE 189


>UniRef50_A0ECF9 Cluster: Chromosome undetermined scaffold_9, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_9,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 805

 Score = 33.5 bits (73), Expect = 9.9
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = +2

Query: 62  KGRXGEXGRXRQKXXEKXGEXGGXGERXGXXXXEKEXKRXKXKREXEXKEGEXEXXXEXX 241
           K R  E  + R+K  EK  E     ER      E+E +R + K   + KE E E   E  
Sbjct: 674 KEREREKEKEREKKREKEKEREREKEREREKEREREKEREREKEREKQKEREREKQKEKK 733

Query: 242 XXXKREXXGXEXXXKK 289
              +RE        KK
Sbjct: 734 LEKEREREREREKEKK 749


>UniRef50_A0D0L0 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
           undetermined scaffold_33, whole genome shotgun sequence
           - Paramecium tetraurelia
          Length = 430

 Score = 33.5 bits (73), Expect = 9.9
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = +2

Query: 62  KGRXGEXGRXRQKXXEKXGEXGGXGERXGXXXXEKEXKRXKXKREXEXKEGEXEXXXEXX 241
           K R  E  R R+K  EK  E     ER      EKE +R K K     KE E E   +  
Sbjct: 242 KEREREREREREKEREKEKEREREREREKEREREKEKEREKEKEREREKEKEREREKQRE 301

Query: 242 XXXKREXXGXEXXXKK 289
              +++    E   +K
Sbjct: 302 KQKQKQKREKEKEKEK 317


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.305    0.126    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,803,901
Number of Sequences: 1657284
Number of extensions: 911745
Number of successful extensions: 1653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 107747421395
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)