Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D19
         (1103 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769...    34   0.17 

>01_05_0199 -
           19174971-19175105,19176302-19176628,19176813-19176915,
           19178852-19178916,19179941-19180048,19180213-19180305,
           19180395-19180442,19180801-19180899,19180980-19181096,
           19181186-19181239,19181312-19181404,19181776-19181881,
           19182050-19182084,19182173-19182259,19182385-19182462,
           19182528-19182596,19182682-19182780,19183644-19183685,
           19184498-19184570,19184654-19184982,19185070-19185127,
           19185217-19185269,19186075-19186144,19186276-19186337,
           19186452-19186540,19186906-19187011,19187110-19187178,
           19187295-19187330
          Length = 900

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 120 RXEXXEKXEAXRXXKKRXKEXKXKEKXRXKREXXKXXXRXXXXGKEKXK 266
           R E   + E  R  K+R KE + KEK R ++E  K   R    GK++ +
Sbjct: 743 REEEKARKEKEREEKERRKEKEKKEKERKEKERDKEKEREKDKGKDRSR 791


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.305    0.126    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,894,805
Number of Sequences: 37544
Number of extensions: 27642
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3316323664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)