Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D17
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307...    29   5.1  
09_04_0625 - 19044775-19045078,19045178-19045382,19045534-190461...    29   5.1  

>12_02_0280 -
           16729000-16729678,16729948-16730039,16730072-16730772,
           16731033-16731144,16731961-16731970,16732954-16733663
          Length = 767

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 149 YTSSHPRLIEKDHLSVDFPVCSRDCWGAVPSKDTRPLNKPVP 274
           YT   P+L EK  L+ DF  C + C GA+P   T  L+   P
Sbjct: 652 YTHRFPKL-EKFILACDFLPCLKFCIGAMPQLQTLKLDDRRP 692


>09_04_0625 -
           19044775-19045078,19045178-19045382,19045534-19046168,
           19046334-19047391
          Length = 733

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -1

Query: 572 SRGQKLFCRSQLLSWRRLDPPISNQANADAQFIGWSSMNTYDVPPAAFGTP 420
           S    L CR  L +W R+D P +   + D +F+   +++  + P A+   P
Sbjct: 658 SEEPSLLCRDDL-NWERIDAPFAEPTSEDEEFV---AIDDEEAPTASLSWP 704


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,893,836
Number of Sequences: 37544
Number of extensions: 528029
Number of successful extensions: 1548
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)