Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D17
         (911 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     27   1.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.7  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 217 RLLGRCSFKRHKTSEQASALRHYSSHRYSDCMQHHNP 327
           R+  + + +R      + +  + SSH +S    HHNP
Sbjct: 322 RMKNKKNSQRQSAQANSGSSNNSSSHSHSQAQPHHNP 358


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = -1

Query: 539  LLSWRRLDPPISNQANADAQFIGWSSMN---TYDVPPAAF 429
            +L W+R+D    N A    +F  W+S      Y+ P A F
Sbjct: 951  VLPWKRVDESDDNGAIKQNEFPSWASNKEYLAYNSPSATF 990


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +3

Query: 567 TGVEMGAISSDYKLIGHNQAMTTECPGGALLEEISTWDNYHPGTR 701
           TG   G  +    +IG +    T C G  + +++  W+    G R
Sbjct: 536 TGTNAGKTTFS-NIIGSSGPSVTSCTGSEIDKQVGLWERRVKGLR 579


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,349
Number of Sequences: 2352
Number of extensions: 19407
Number of successful extensions: 140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)