Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D17
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    29   3.5  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    29   3.5  
Z54281-2|CAA91045.3|  399|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical ...    29   6.1  

>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 289 MNNDVGHWLVQRSCVF*RNSAP 224
           M  DVGHW+ +R C    NS+P
Sbjct: 797 MRKDVGHWMYRRGCGGSSNSSP 818


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 289 MNNDVGHWLVQRSCVF*RNSAP 224
           M  DVGHW+ +R C    NS+P
Sbjct: 799 MRKDVGHWMYRRGCGGSSNSSP 820


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 289 MNNDVGHWLVQRSCVF*RNSAP 224
           M  DVGHW+ +R C    NS+P
Sbjct: 797 MRKDVGHWMYRRGCGGSSNSSP 818


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 289 MNNDVGHWLVQRSCVF*RNSAP 224
           M  DVGHW+ +R C    NS+P
Sbjct: 799 MRKDVGHWMYRRGCGGSSNSSP 820


>Z54281-2|CAA91045.3|  399|Caenorhabditis elegans Hypothetical
           protein F46C5.3 protein.
          Length = 399

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 377 WG-DIGYHFCVGGDGVAYRRPRVERHRYSCWTSQ*IEHRHLPDWRLEGRDASS*AVGYDK 553
           WG     H  +   G+ + + R +R+RY    +Q I++R LP++ L      +  V YD 
Sbjct: 127 WGMGTAIHELMHAIGIEHTQSRSDRNRYLDILAQNIDNRDLPNFELLSPRLWANLVPYDY 186

Query: 554 KASVHGSGN 580
            + +H S +
Sbjct: 187 GSVMHYSAD 195


>AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical
           protein F13C5.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 454 PMTFHPRPSVRHPIAAHAEMVSNVTPA*GIVVFLHASHISHTMGCGVAYSRNSG 293
           P+  HP  ++  P A H+ + S+   A G +   H  HI  +   G A    +G
Sbjct: 317 PVAKHPEAAMPEPAAEHSSIQSSEAQALGEISGAHPIHIGESEIAGHAADSTTG 370


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,176,692
Number of Sequences: 27780
Number of extensions: 404789
Number of successful extensions: 1039
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)