Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D17
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   8.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 581 HFHSRGQKLFCRSQLLSWRRLDPPISNQANADAQFI 474
           H ++R Q       L SWR L    SN+ N+D + I
Sbjct: 255 HLYTRDQSE-TYDVLRSWRNLMDEHSNRTNSDPRMI 289


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 498 GKCRCSIYWLVQHEYL*RSTRGLRYATPSPPTQKWYPMSPQPK 370
           GK     YWL + E+   ST+G+      PP  +W+  S + +
Sbjct: 586 GKGIMKTYWLEKREHRSSSTKGI--TIQEPP--QWHTRSTEKR 624


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 544 LRQKSFCPREWKWELLAPIT 603
           +R ++ CP +W W ++ PI+
Sbjct: 377 MRLRNGCPADWLW-IVPPIS 395


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 402 AWAAMGWRTEGRGWNV 449
           A A + W  EG+ WN+
Sbjct: 51  ALANITWYNEGQAWNI 66


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 402 AWAAMGWRTEGRGWNV 449
           A A + W  EG+ WN+
Sbjct: 51  ALANITWYNEGQAWNI 66


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 354 RNTTIP*AGVTLDTISAWAAMGWRTEG 434
           +  T P   V  +TIS+ A +G+R EG
Sbjct: 392 QGVTKPRYMVWRETISSTATLGFRVEG 418


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 354 RNTTIP*AGVTLDTISAWAAMGWRTEG 434
           +  T P   V  +TIS+ A +G+R EG
Sbjct: 307 QGVTKPRYMVWRETISSTATLGFRVEG 333


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 354 RNTTIP*AGVTLDTISAWAAMGWRTEG 434
           +  T P   V  +TIS+ A +G+R EG
Sbjct: 626 QGVTKPRYMVWRETISSTATLGFRVEG 652


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,899
Number of Sequences: 438
Number of extensions: 5460
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)