Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D15
         (1392 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    37   0.20 
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    37   0.20 
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    37   0.20 
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          37   0.20 
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    35   0.61 

>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 36.7 bits (81), Expect = 0.20
 Identities = 27/74 (36%), Positives = 29/74 (39%)
 Frame = -3

Query: 232 PXXGGXYXXRPPLXTVXGXRPXXXPYSXVXXXPXGXXPPXPPLPXGXX*IPXTLXXGGPP 53
           P  GG    RPP+  V G +    P   V   P G  PP PP P G    P     GGPP
Sbjct: 319 PSRGGNQLPRPPI--VGGNKGRSGPLPPV---PLGIAPP-PPTPRG----PPPPGRGGPP 368

Query: 52  PYXTXXXGXGGXXP 11
           P      G  G  P
Sbjct: 369 PPPPPATGRSGPLP 382


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 36.7 bits (81), Expect = 0.20
 Identities = 27/74 (36%), Positives = 29/74 (39%)
 Frame = -3

Query: 232 PXXGGXYXXRPPLXTVXGXRPXXXPYSXVXXXPXGXXPPXPPLPXGXX*IPXTLXXGGPP 53
           P  GG    RPP+  V G +    P   V   P G  PP PP P G    P     GGPP
Sbjct: 319 PSRGGNQLPRPPI--VGGNKGRSGPLPPV---PLGIAPP-PPTPRG----PPPPGRGGPP 368

Query: 52  PYXTXXXGXGGXXP 11
           P      G  G  P
Sbjct: 369 PPPPPATGRSGPLP 382


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 36.7 bits (81), Expect = 0.20
 Identities = 27/74 (36%), Positives = 29/74 (39%)
 Frame = -3

Query: 232 PXXGGXYXXRPPLXTVXGXRPXXXPYSXVXXXPXGXXPPXPPLPXGXX*IPXTLXXGGPP 53
           P  GG    RPP+  V G +    P   V   P G  PP PP P G    P     GGPP
Sbjct: 319 PSRGGNQLPRPPI--VGGNKGRSGPLPPV---PLGIAPP-PPTPRG----PPPPGRGGPP 368

Query: 52  PYXTXXXGXGGXXP 11
           P      G  G  P
Sbjct: 369 PPPPPATGRSGPLP 382


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 36.7 bits (81), Expect = 0.20
 Identities = 27/74 (36%), Positives = 29/74 (39%)
 Frame = -3

Query: 232 PXXGGXYXXRPPLXTVXGXRPXXXPYSXVXXXPXGXXPPXPPLPXGXX*IPXTLXXGGPP 53
           P  GG    RPP+  V G +    P   V   P G  PP PP P G    P     GGPP
Sbjct: 331 PSRGGNQLPRPPI--VGGNKGRSGPLPPV---PLGIAPP-PPTPRG----PPPPGRGGPP 380

Query: 52  PYXTXXXGXGGXXP 11
           P      G  G  P
Sbjct: 381 PPPPPATGRSGPLP 394


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 35.1 bits (77), Expect = 0.61
 Identities = 26/74 (35%), Positives = 28/74 (37%)
 Frame = -3

Query: 232 PXXGGXYXXRPPLXTVXGXRPXXXPYSXVXXXPXGXXPPXPPLPXGXX*IPXTLXXGGPP 53
           P  GG    RPP+    G +    P   V   P G  PP PP P G    P     GGPP
Sbjct: 319 PSRGGNQLPRPPI--AGGNKGRSGPLPPV---PLGIAPP-PPTPRG----PPPPGRGGPP 368

Query: 52  PYXTXXXGXGGXXP 11
           P      G  G  P
Sbjct: 369 PPPPPATGRSGPLP 382


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.310    0.133    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,081,118
Number of Sequences: 237096
Number of extensions: 1509565
Number of successful extensions: 2225
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2059
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20279379580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)