Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D14
         (857 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p pro...   163   4e-40
AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA...   163   4e-40
AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB...   163   4e-40

>AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p
           protein.
          Length = 286

 Score =  163 bits (395), Expect = 4e-40
 Identities = 82/175 (46%), Positives = 109/175 (62%)
 Frame = +1

Query: 172 SLQXASSXQIFGGXQKVXSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 351
           +L+  S+ + F G Q+V  H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 352 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 531
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 532 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGSVQVSKRF 696
           M SY+  EL D ++ A   VV P +            AL   L+NPG  Q    F
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAF 173



 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 677 YKSVSAFAPICNPSACPWGSESFXWIFXXXXXXXXXXXCHRXGXKYNGPPLTLXLXQGS 853
           Y+SVSAFAPI NP+ CPWG ++F                     +Y   P  L + QG+
Sbjct: 167 YQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGA 225


>AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA,
           isoform A protein.
          Length = 286

 Score =  163 bits (395), Expect = 4e-40
 Identities = 82/175 (46%), Positives = 109/175 (62%)
 Frame = +1

Query: 172 SLQXASSXQIFGGXQKVXSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 351
           +L+  S+ + F G Q+V  H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 352 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 531
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 532 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGSVQVSKRF 696
           M SY+  EL D ++ A   VV P +            AL   L+NPG  Q    F
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAF 173



 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 677 YKSVSAFAPICNPSACPWGSESFXWIFXXXXXXXXXXXCHRXGXKYNGPPLTLXLXQGS 853
           Y+SVSAFAPI NP+ CPWG ++F                     +Y   P  L + QG+
Sbjct: 167 YQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGA 225


>AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB,
           isoform B protein.
          Length = 330

 Score =  163 bits (395), Expect = 4e-40
 Identities = 82/175 (46%), Positives = 109/175 (62%)
 Frame = +1

Query: 172 SLQXASSXQIFGGXQKVXSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 351
           +L+  S+ + F G Q+V  H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 46  TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 104

Query: 352 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 531
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 105 NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 164

Query: 532 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGSVQVSKRF 696
           M SY+  EL D ++ A   VV P +            AL   L+NPG  Q    F
Sbjct: 165 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAF 217



 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 677 YKSVSAFAPICNPSACPWGSESFXWIFXXXXXXXXXXXCHRXGXKYNGPPLTLXLXQGS 853
           Y+SVSAFAPI NP+ CPWG ++F                     +Y   P  L + QG+
Sbjct: 211 YQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGA 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,388,274
Number of Sequences: 53049
Number of extensions: 657006
Number of successful extensions: 1431
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)