Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D14
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical ... 152 4e-37
AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical... 152 4e-37
Z49131-5|CAA88978.1| 217|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 7.4
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 7.4
Z36752-1|CAA85323.2| 150|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 7.4
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 7.4
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 7.4
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 7.4
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 7.4
>AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 152 bits (368), Expect = 4e-37
Identities = 77/170 (45%), Positives = 101/170 (59%)
Frame = +1
Query: 187 SSXQIFGGXQKVXSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFITK 366
SS + F G Q V HASS +C+M F +Y+P D KLP L+YLSGLTC+ NF+ K
Sbjct: 7 SSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFMEK 64
Query: 367 SGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYL 546
SGFQ++A++H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM Y+
Sbjct: 65 SGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYDYI 124
Query: 547 NVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGSVQVSKRF 696
EL + ++ + +D + AL LRN Q F
Sbjct: 125 VKELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAF 173
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 674 QYKSVSAFAPICNPSACPWGSES 742
+++S+SAFAPICNP PWG ++
Sbjct: 166 KFQSISAFAPICNPITVPWGQKA 188
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 717 VLVHGGVKAFXGYLG-EDKSKWAEWDATXLV 806
+ V G KA GYLG EDKS W ++DA+ ++
Sbjct: 180 ITVPWGQKALTGYLGDEDKSTWNQYDASEVL 210
>AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 152 bits (368), Expect = 4e-37
Identities = 77/170 (45%), Positives = 101/170 (59%)
Frame = +1
Query: 187 SSXQIFGGXQKVXSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFITK 366
SS + F G Q V HASS +C+M F +Y+P D KLP L+YLSGLTC+ NF+ K
Sbjct: 7 SSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFMEK 64
Query: 367 SGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYL 546
SGFQ++A++H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM Y+
Sbjct: 65 SGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYDYI 124
Query: 547 NVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGSVQVSKRF 696
EL + ++ + +D + AL LRN Q F
Sbjct: 125 VKELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAF 173
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 674 QYKSVSAFAPICNPSACPWGSES 742
+++S+SAFAPICNP PWG ++
Sbjct: 166 KFQSISAFAPICNPITVPWGQKA 188
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 717 VLVHGGVKAFXGYLG-EDKSKWAEWDATXLV 806
+ V G KA GYLG EDKS W ++DA+ ++
Sbjct: 180 ITVPWGQKALTGYLGDEDKSTWNQYDASEVL 210
>Z49131-5|CAA88978.1| 217|Caenorhabditis elegans Hypothetical
protein ZC373.6 protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 430 RGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNR 606
+G+ I G + +S G+ +T +P+N N+ V++ D + F V+ P R
Sbjct: 159 QGLDIHGGSGGYHRALSGGYLPPSTYDPYNVNWHSYGDEGVKMKDKAISVFRRVIAPGR 217
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z36752-1|CAA85323.2| 150|Caenorhabditis elegans Hypothetical
protein F35H8.1 protein.
Length = 150
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 322 YLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDA 501
YLS L C FI G +R A E +++ + + + +D ++ F VS F D
Sbjct: 3 YLSNLLCLTLTFIVCFGAERDADEEAYVLM--NLLKQSIDMDQTEALPGF-VSRDFTYDT 59
Query: 502 TNEPWNNNYRMGSYLNV 552
WN + M YL V
Sbjct: 60 CKGIWNRDKYM-EYLKV 75
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 661 HLLECPHNCPTNIYSLMVECWHENIER 687
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 562 HIIQHSNNCPFCNYYSMVHLWHLNKNR 482
H+++ +NCP Y MV WH N R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,911,108
Number of Sequences: 27780
Number of extensions: 329907
Number of successful extensions: 693
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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