Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_D14
         (857 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41530.1 68415.m05132 esterase, putative similar to SP|P10768...   143   1e-34
At5g23575.1 68418.m02766 transmembrane protein, putative similar...    29   4.0  
At2g32460.1 68415.m03965 myb family transcription factor (MYB101...    28   9.1  
At1g48390.1 68414.m05405 syntaxin-related family protein contain...    28   9.1  

>At2g41530.1 68415.m05132 esterase, putative similar to SP|P10768
           Esterase D (EC 3.1.1.1) {Homo sapiens}; contains Pfam
           profile: PF00756 putative esterase
          Length = 284

 Score =  143 bits (347), Expect = 1e-34
 Identities = 75/164 (45%), Positives = 98/164 (59%)
 Frame = +1

Query: 175 LQXASSXQIFGGXQKVXSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQN 354
           L    S ++F G  K   H S  L C M FSIY PP A     K P+LY+LSGLTC+++N
Sbjct: 5   LSEIGSTKMFDGYNKRYKHFSETLGCSMTFSIYFPPSASSSH-KSPVLYWLSGLTCTDEN 63

Query: 355 FITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRM 534
           FI KSG QR A+ HG+ +V PDTSPRG+ ++G+  S+DFGV AGFYL+AT E W  N+RM
Sbjct: 64  FIIKSGAQRAASTHGIALVAPDTSPRGLNVEGEADSYDFGVGAGFYLNATQEKW-KNWRM 122

Query: 535 GSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRN 666
             Y+  EL  L+ + F + +D  +            AL   LRN
Sbjct: 123 YDYVVKELPKLLSENF-SQLDTTKASISGHSMGGHGALTIYLRN 165



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/61 (37%), Positives = 28/61 (45%)
 Frame = +2

Query: 668 LXQYKSVSAFAPICNPSACPWGSESFXWIFXXXXXXXXXXXCHRXGXKYNGPPLTLXLXQ 847
           L +YKSVSAFAPI NP  C WG ++F                     KYN    T+ + Q
Sbjct: 166 LDKYKSVSAFAPITNPINCAWGQKAFTNYLGDNKAAWEEYDATCLISKYNNLSATILIDQ 225

Query: 848 G 850
           G
Sbjct: 226 G 226


>At5g23575.1 68418.m02766 transmembrane protein, putative similar to
           cleft lip and palate transmembrane protein 1 [Homo
           sapiens] GI:4039014; contains Pfam profile PF05602:
           Cleft lip and palate transmembrane protein 1 (CLPTM1)
          Length = 593

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 476 TPKSHDESSPSILTPRGEVSGPTTITPCSAAYLWKPDLVM 357
           +PK  DES P +     + S P    P     LWKP++ +
Sbjct: 182 SPKDSDESEPEVEKVGDKKSDPKEEVPVEWISLWKPNVTI 221


>At2g32460.1 68415.m03965 myb family transcription factor (MYB101)
           identical to putative transcription factor MYB101
           GI:18087348 from [Arabidopsis thaliana]
          Length = 490

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 243 TKMQNEFFYLSPPSG 287
           T+MQNE  YL+PPSG
Sbjct: 435 TEMQNEASYLAPPSG 449


>At1g48390.1 68414.m05405 syntaxin-related family protein contains a
           novel domain similar to F-box that is shared among other
           proteins in Arabidopsis; similar to proteins At3g54160,
           At1g47920 (syntaxin SYP81), At5g41830, At3g44180,
           At3g58890, At1g56610, At1g48390, At3g59270 [Arabidopsis
           thaliana]
          Length = 413

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 445 DGDDSSWDFGVSAGFYLDATN 507
           DGD   WDF V   +Y D TN
Sbjct: 235 DGDVYGWDFNVPFDYYGDVTN 255


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,077,506
Number of Sequences: 28952
Number of extensions: 312401
Number of successful extensions: 599
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)