Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D12
(876 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 2e-65
SB_56| Best HMM Match : Actin (HMM E-Value=0) 246 2e-65
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 246 2e-65
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 245 3e-65
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 2e-59
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 7e-44
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 1e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 115 6e-26
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 105 4e-23
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 99 2e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 72 5e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 4e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 4e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 1e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 41 0.001
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 36 0.043
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54) 31 0.92
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 31 1.2
SB_55898| Best HMM Match : Carb_anhydrase (HMM E-Value=3.6) 31 1.6
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 2.1
SB_19559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_4757| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 3.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 4.9
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 6.5
SB_44810| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_10144| Best HMM Match : Extensin_2 (HMM E-Value=0.79) 28 8.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 8.6
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 246 bits (602), Expect = 2e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIV+DSGDGV+H
Sbjct: 103 VLLTEAPLNPKANREKM-TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH 161
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 162 TVPIYEGYALPHAILRLDL 180
Score = 115 bits (277), Expect = 4e-26
Identities = 57/62 (91%), Positives = 58/62 (93%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEM T AS+SLE
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLE 237
Query: 832 KS 837
KS
Sbjct: 238 KS 239
Score = 94.3 bits (224), Expect = 1e-19
Identities = 64/138 (46%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Frame = +2
Query: 119 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLR 277
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E +
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 278 G*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQG 457
RG +YP + H + E + H
Sbjct: 62 --RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 113
Query: 458 PTGXKMTQIMFETFNSPA 511
KMTQIMFETFNSPA
Sbjct: 114 ANREKMTQIMFETFNSPA 131
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 246 bits (602), Expect = 2e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIV+DSGDGV+H
Sbjct: 103 VLLTEAPLNPKANREKM-TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH 161
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 162 TVPIYEGYALPHAILRLDL 180
Score = 118 bits (283), Expect = 8e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLE 237
Query: 832 KS 837
KS
Sbjct: 238 KS 239
Score = 92.7 bits (220), Expect = 4e-19
Identities = 63/138 (45%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Frame = +2
Query: 119 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLR 277
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E +
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 278 G*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQG 457
RG +YP + H + E + H
Sbjct: 62 --RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 113
Query: 458 PTGXKMTQIMFETFNSPA 511
KMTQIMFETFNSPA
Sbjct: 114 ANREKMTQIMFETFNSPA 131
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 246 bits (602), Expect = 2e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIV+DSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 8e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 101 bits (242), Expect = 8e-22
Identities = 67/140 (47%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFNSPA
Sbjct: 113 PKANREKMTQIMFETFNSPA 132
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 115/139 (82%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIV+DSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAI+R L
Sbjct: 163 TVPIYEGYALPHAIIRLDL 181
Score = 118 bits (283), Expect = 8e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 94.3 bits (224), Expect = 1e-19
Identities = 64/140 (45%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFNSPA
Sbjct: 113 PKANREKMTQIMFETFNSPA 132
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 226 bits (552), Expect = 2e-59
Identities = 108/131 (82%), Positives = 114/131 (87%), Gaps = 2/131 (1%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIV+DSGDGVSH
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSH 162
Query: 603 TVPIYE--GYA 629
TVPIYE GY+
Sbjct: 163 TVPIYEERGYS 173
Score = 97.1 bits (231), Expect = 2e-20
Identities = 64/140 (45%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFNSPA
Sbjct: 113 PKANREKMTQIMFETFNSPA 132
Score = 87.4 bits (207), Expect = 1e-17
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +1
Query: 643 SSGLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXAST 822
++G+ + D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+
Sbjct: 149 TTGIVMDSGDGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 208
Query: 823 SLEKS 837
S+EKS
Sbjct: 209 SIEKS 213
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 118 bits (283), Expect = 8e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 141 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLE 200
Query: 832 KS 837
KS
Sbjct: 201 KS 202
Score = 98.7 bits (235), Expect(2) = 7e-44
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 386
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 97.5 bits (232), Expect(2) = 7e-44
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3
Query: 507 PPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 659
P MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+R L
Sbjct: 93 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 143
Score = 91.5 bits (217), Expect = 8e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 119 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 241
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 127 bits (306), Expect = 1e-29
Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Frame = +3
Query: 264 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 440
KD VGDEA R +L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 441 PLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 620
PLNP + + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YE
Sbjct: 113 PLNPMKNREKM-IEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYE 171
Query: 621 GYALPHAILR 650
G+ALPH R
Sbjct: 172 GFALPHLTRR 181
Score = 67.3 bits (157), Expect = 2e-11
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSL- 828
LD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE +T L
Sbjct: 182 LDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 829 EKSTNSDVR 855
E+ T D R
Sbjct: 242 EQYTLPDGR 250
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 131 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 115 bits (276), Expect = 6e-26
Identities = 58/98 (59%), Positives = 69/98 (70%)
Frame = +3
Query: 366 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSL 545
K+W H F ++LRV E+ PVLLTEAPLNPK + R + P MYVA+QAV++L
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERM-VQLMFESFNVPCMYVAVQAVMAL 2187
Query: 546 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 659
YASGRTTG V D GDGVSHTVP+Y+GY LPHA R L
Sbjct: 2188 YASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDL 2225
Score = 82.2 bits (194), Expect = 5e-16
Identities = 35/66 (53%), Positives = 49/66 (74%)
Frame = +1
Query: 634 PTPSSGLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXX 813
P + +DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+
Sbjct: 2217 PHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAE 2276
Query: 814 ASTSLE 831
S E
Sbjct: 2277 TSDDCE 2282
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 80 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 238
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 105 bits (253), Expect = 4e-23
Identities = 50/103 (48%), Positives = 71/103 (68%)
Frame = +3
Query: 414 EHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDG 593
+HPVLLTEAPLNP+ + + P +++++QAVLSLYA+GRTTG+VLD+GDG
Sbjct: 126 QHPVLLTEAPLNPRRNREKA-AEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDG 184
Query: 594 VSHTVPIYEGYALPHAILRSGLGWSRLDRLPHEDPHREGLLVH 722
VSH+VPIYEG+A+PH+I+R+ + + R +EG H
Sbjct: 185 VSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFH 227
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +1
Query: 655 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 765
D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 205 DIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 99 bits (238), Expect = 2e-21
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 801
LDLAGRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 57 LDLAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
Score = 94.7 bits (225), Expect = 9e-20
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = +3
Query: 507 PPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 659
P +YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILR L
Sbjct: 9 PAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL 59
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 72.1 bits (169), Expect = 5e-13
Identities = 36/112 (32%), Positives = 64/112 (57%)
Frame = +3
Query: 324 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPST 503
PI+ G+I +WD EKI + + ++ HP+L++EA N + ++ +
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKL-TELMFEKYN 61
Query: 504 PPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGL 659
P ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+RS L
Sbjct: 62 VPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 238
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 252 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.53
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 564 TGIVLDSGDGVSHTVPI 614
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 235 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 119
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSL 828
L++ G LT+ L + L + RG++FT+++ +IV DIKEK+CY++ D +E+ + L
Sbjct: 808 LEIGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGL 867
Query: 829 EK 834
K
Sbjct: 868 TK 869
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +2
Query: 74 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 232
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
Score = 41.5 bits (93), Expect = 9e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 528 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGLGWSRL 674
Q LSLYASG T G+ L SG + IYEG+ L H + +G L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHL 815
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Frame = +3
Query: 510 PMYVAIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAI 644
P Y A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I
Sbjct: 37 PSY-ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 798
+ +AGRD+T ++ ++L ER E + IKE+ Y+ D +E
Sbjct: 91 IPIAGRDITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKE 139
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 35.9 bits (79), Expect = 0.043
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 159 ACARPVSPATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKY--PIE 332
AC++ + A+ + AP S P+ + A ++ ++GD+ + + L Y P +
Sbjct: 242 ACSQKIGFASNQ-APRSIPNAIFKAKSE------RRKLFIGDQIEECKDYSALFYVLPFQ 294
Query: 333 HGIITNWDDMEKIWHHTFYNE 395
G + NWD ++IW +TF E
Sbjct: 295 KGFLVNWDVEKQIWDYTFGKE 315
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 128 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 244
+A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 108 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 212
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54)
Length = 214
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -1
Query: 798 LLLEVEGDIAELLLDVTNDFPLSGGGERVTPLGEDLHEVVGQVATSQ-VQTG 646
L+LEV+ + + L D+ ND+PL+ G +V + L E ++AT +QTG
Sbjct: 34 LILEVDLEYPKSLYDLHNDYPLAAG--KVNVSKDMLSEYCDKIATKYGIQTG 83
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 647 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGGVQ---REHGLDGD 519
+DG G VDG GVGD G + D G GG + G+DGD
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGGDDDGGDDDGVDGD 54
>SB_55898| Best HMM Match : Carb_anhydrase (HMM E-Value=3.6)
Length = 531
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = +1
Query: 598 PTPYPSTKVTLCPTPSSGLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 777
P P TK T C TP+ +TD + + +T+R YS T E E+V + + +
Sbjct: 242 PHPIIDTK-TQCVTPTDVAQTPKHSVTD-VTQTVTQR-YSQTARDEEEVVPILAARSMFK 298
Query: 778 ALDFEQEMXTXXASTSLEKSTN 843
E E+ T TSL+ N
Sbjct: 299 LGRMEWEVLTKEGWTSLDDHKN 320
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 315 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNP 452
L+ P + ++T+++ E++ H F + P HPV++TE NP
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNP 178
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 108 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 212
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_19559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 366 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMY 518
++ H+ EL + P+E PV+ TE P++ Q+G + +C PPP Y
Sbjct: 119 ELMEHSEALEL-LKPDEPPVI-TEQPMSLPVQEGLKLELTCRATGFPPPQY 167
>SB_4757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -1
Query: 798 LLLEVEGDIAELLLDVTNDFPLSGGGERVTPLGEDLHEVVGQVATSQ-VQTG 646
L+L+V+ + + L D+ ND+PL+ ERV + L E ++AT +QTG
Sbjct: 14 LILKVDLEYPKSLHDLHNDYPLA--AERVNVSKDMLSEYCDKIATKYGIQTG 63
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 99 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 212
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +2
Query: 197 RAVFPSIV----GRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHR 331
R+V PS V G R + R PER +G ++ER HSE P R
Sbjct: 988 RSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQSHSESPQR 1036
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 60 LP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 212
LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 397 LPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 180 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRG-ILTLKYPIEHGIITNW- 353
P P SRP V L+ V V ++ G + K+ ++TL + I G+ +
Sbjct: 429 PWAPEPENFSRP--VTLSQNVVSVTGREESGGSGTQVCRKKAPLITLSHVIRMGLALSLV 486
Query: 354 -DDMEKIWHHTFYN 392
D EK+W+HT N
Sbjct: 487 SDVKEKVWYHTCPN 500
>SB_44810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 647 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGGVQREHGLDGD 519
+DGVG VDG G G V D GG G DGD
Sbjct: 31 DDGVGGGYNGVDGDGDGSDGGVVNGDNGGGDNGGGDNGDSDGD 73
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 285 RHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPEP 151
RH R LS Y P W + G T R PAKP+L++P P
Sbjct: 520 RHYNR-LSNQY----PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_10144| Best HMM Match : Extensin_2 (HMM E-Value=0.79)
Length = 701
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 798 LLLEVEGDIAELLLDVTNDFPLSGGGERVTPLGEDLHEVVGQVATS 661
L+LEV+ D + L D+ ND+PL+ ERV + L E +++T+
Sbjct: 481 LILEVDLDYPKHLHDLHNDYPLA--VERVNVSKDMLSEYCNRISTT 524
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 93 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 218
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 108 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 212
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 297 CSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPAL 166
C+ P S GP R S P RG PT +RG +P K A+
Sbjct: 1301 CTTPHRSSASF-GPNRVSTPK-RGSPTSRNTPSRGLRTPVKTAM 1342
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,755,116
Number of Sequences: 59808
Number of extensions: 593496
Number of successful extensions: 2182
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -