Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_D12
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 247 9e-66
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 247 9e-66
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 246 1e-65
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 246 1e-65
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 246 1e-65
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 246 1e-65
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 246 1e-65
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 246 1e-65
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 246 1e-65
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 245 4e-65
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 240 8e-64
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 161 8e-40
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 124 6e-29
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 106 2e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 83 2e-16
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.088
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.088
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.6
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 247 bits (604), Expect = 9e-66
Identities = 117/139 (84%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIVLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 100 bits (239), Expect = 2e-21
Identities = 66/140 (47%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 247 bits (604), Expect = 9e-66
Identities = 117/139 (84%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTGIVLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 64/140 (45%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/140 (46%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/140 (46%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/140 (46%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/140 (46%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/140 (46%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 90 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 148
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 149 TVPIYEGYALPHAILRLDL 167
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 165 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 224
Query: 832 KS 837
KS
Sbjct: 225 KS 226
Score = 59.7 bits (138), Expect = 3e-09
Identities = 47/122 (38%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = +2
Query: 167 KAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLRG*RGPEQERYPHSEVP 325
+AGFAGDDAPRAVFPSIVGRPRHQG +D G E + RG +YP +
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK--RGILTLKYP---IE 59
Query: 326 HRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQGPTGXKMTQIMFETFNS 505
H + E + H KMTQIMFETFN+
Sbjct: 60 HGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 506 PA 511
PA
Sbjct: 117 PA 118
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 246 bits (603), Expect = 1e-65
Identities = 116/139 (83%), Positives = 122/139 (87%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 104 VLLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAILR L
Sbjct: 163 TVPIYEGYALPHAILRLDL 181
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 832 KS 837
KS
Sbjct: 239 KS 240
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/140 (46%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 271
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 272 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 451
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 452 QGPTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 113 PKANREKMTQIMFETFNTPA 132
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 245 bits (599), Expect = 4e-65
Identities = 115/138 (83%), Positives = 121/138 (87%)
Frame = +3
Query: 246 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 425
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 426 LLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
LLTEAPLNPK + + + P MYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 61 LLTEAPLNPKANREKM-TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 119
Query: 606 VPIYEGYALPHAILRSGL 659
VPIYEGYALPHAILR L
Sbjct: 120 VPIYEGYALPHAILRLDL 137
Score = 118 bits (283), Expect = 7e-27
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T +S+SLE
Sbjct: 135 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 194
Query: 832 KS 837
KS
Sbjct: 195 KS 196
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 240 bits (588), Expect = 8e-64
Identities = 113/139 (81%), Positives = 120/139 (86%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 423 VLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
VLLTEAPLNPK + + + P MYV IQAVLSLYASGRTTGIVLD+GDGV+H
Sbjct: 103 VLLTEAPLNPKSNREKM-TQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTH 161
Query: 603 TVPIYEGYALPHAILRSGL 659
TVPIYEGYALPHAI R L
Sbjct: 162 TVPIYEGYALPHAIQRLDL 180
Score = 107 bits (258), Expect = 8e-24
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+ +S+SLE
Sbjct: 178 LDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLE 237
Query: 832 KS 837
KS
Sbjct: 238 KS 239
Score = 89.4 bits (212), Expect = 3e-18
Identities = 60/138 (43%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Frame = +2
Query: 119 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLR 277
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E +
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 278 G*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQG 457
RG +YP + H + E + H
Sbjct: 62 --RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 113
Query: 458 PTGXKMTQIMFETFNSPA 511
KMTQIMFETFN+PA
Sbjct: 114 SNREKMTQIMFETFNTPA 131
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 161 bits (390), Expect = 8e-40
Identities = 78/161 (48%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 419
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 420 PVLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGIVLDSGDGVS 599
PVLLT+APLNP + R P +Y+ +QAVLSLYA+GRTTG+VLDSGDGV+
Sbjct: 106 PVLLTDAPLNPLKNRERS-AEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVT 164
Query: 600 HTVPIYEGYALPHAILRSGLGWSRLDRLPHEDPHREGLLVH 722
H VPI +G+A+ HAI R L + REG H
Sbjct: 165 HAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFH 205
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD-FEQEMXTXXASTSL 828
+DLAGRD+T+YL +L GY F + E EIVR++KE CY+ALD + E + +S +L
Sbjct: 182 MDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALDPTKVENNSVKSSYAL 241
Query: 829 EKSTNSDV 852
+T ++
Sbjct: 242 PDTTKIEI 249
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +2
Query: 119 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 235
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 124 bits (300), Expect = 6e-29
Identities = 68/158 (43%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 180 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 359
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 360 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAV 536
M +W HTF E L + P+E +LLTE PLNP + + + +YVA+QAV
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF-QVMFEQYGFNSIYVAVQAV 143
Query: 537 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 650
L+LYA G TG+V+DSGDGV+H P+YEG+AL H R
Sbjct: 144 LTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRR 181
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLE 831
LD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE +T L
Sbjct: 182 LDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLS 241
Query: 832 K 834
+
Sbjct: 242 Q 242
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 106 bits (255), Expect = 2e-23
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 419
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 420 PVLLTEAPLN-PKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRT--------TGI 572
LLTE PLN P+ ++ P +Y+A+QAVL+L AS + TG+
Sbjct: 116 FFLLTEPPLNTPENREYT--AEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGL 173
Query: 573 VLDSGDGVSHTVPIYEGYALPHAI 644
V+DSGDGV+H +P+ +GY + I
Sbjct: 174 VIDSGDGVTHCIPVADGYVIGSCI 197
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 798
+ +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 200 IPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 220
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 241
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 371
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 241
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 362
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 241
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 371
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 113 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 241
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 371
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 83.4 bits (197), Expect = 2e-16
Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +3
Query: 327 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTP 506
++ G+I +W+ EKI H++ N L P EHPVL +E+ N + ++ +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKL-TEIMFEKFQV 152
Query: 507 PPMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRSGLGWSRL-DRL 683
P Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ +G + ++L
Sbjct: 153 PAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQL 212
Query: 684 PHEDPHREGLLVHHHR*EGNRS*HQGEALLCRPR 785
++ ++ +R G ++GEA PR
Sbjct: 213 AQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTPR 246
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 122 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 220
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.012
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +3
Query: 393 ELRVAPEEHPVLLTEAPLNPKGQQGRR*PRSCLRPSTPPPMYVAIQAVLSLYASGRTTGI 572
EL+V P ++ VLL+ P G + CL + Q L LYA TTG+
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGEL-LQICLEDIKFQSAGITRQPSLILYAYDVTTGV 324
Query: 573 VLDSGDGVSHTVPIYEGYALPHAI 644
V+D G+ V + VP+ +GY + AI
Sbjct: 325 VVDIGERV-NIVPVIDGYVVESAI 347
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.088
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 261 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 386
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.088
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 261 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 386
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 144 STMAPACARPVSPATTRPAPSSRP 215
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 291 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 157
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 291 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 157
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 291 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 157
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 291 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 157
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 291 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 178
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 595 TPSPESSTIPVVRPEAYSESTAWMATYM 512
TP P SST+PVV P ++ T +Y+
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYL 892
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 309 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 157
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 227 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 346
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 135 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 239
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,869,351
Number of Sequences: 27780
Number of extensions: 411540
Number of successful extensions: 1750
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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